RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TMEM67Q5HYA8 995 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 E4F1Q66K89 784 aaPredicted RBP6□□□□□ -1.45
TOPBP1-204ENST00000505804 IQCEQ6IPM2 695 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 NLGN1Q8N2Q7 840 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 DIO2Q92813 273 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 FANCLQ9NW38 375 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 TMEM260Q9NX78 707 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 GPR160Q9UJ42 338 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQC6 194 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 SMARCA5O60264 1052 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 PPP1R11O60927 126 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 LTBRP36941 435 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 ACBD5Q5T8D3 534 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 GALNT18Q6P9A2 607 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 KCNT2Q6UVM3 1135 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 ATG4DQ86TL0 474 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 RCBTB1Q8NDN9 531 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 FLAD1Q8NFF5 587 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 ABHD4Q8TB40 342 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 ASIC4Q96FT7 647 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 IMPACTQ9P2X3 320 aa5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-204ENST00000505804 CCDC163A0A0D9SF12 145 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 LOC105371045A0A1W2PR82 267 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 PPP1R12AO14974 1030 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 C6orf222P0C671 652 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 MSL3P1P0C860 447 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 PRKCAP17252 672 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 MVKQ03426 396 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 CBX2Q14781 532 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 SDE2Q6IQ49 451 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 HOMER1Q86YM7 354 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 LILRA2Q8N149 483 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 NUP43Q8NFH3 380 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 DCAF4Q8WV16 495 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 APPBP2Q92624 585 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 DPF3Q92784 378 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 SHISA4Q96DD7 197 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 KIRREL1Q96J84 757 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 GULP1Q9UBP9 304 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 TRAF6Q9Y4K3 522 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 PCDHA2Q9Y5H9 948 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 NPFFR2Q9Y5X5 522 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 TAF6LQ9Y6J9 622 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 ASXL2Q76L83 1435 aa5.98□□□□□ -1.45
TOPBP1-204ENST00000505804 NPHS1O60500 1241 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 MSCO60682 206 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 ASMTLO95671 621 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 IRAK1P51617 712 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 KCNAB2Q13303 367 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 SNX17Q15036 470 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 TESK1Q15569 626 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 NLRX1Q86UT6 975 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 NLGN2Q8NFZ4 835 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 PHF20Q9BVI0 1012 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 RNF32Q9H0A6 362 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 BTG4Q9NY30 223 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 RWDD3Q9Y3V2 267 aa5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 TIMM13Q9Y5L4 95 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-204ENST00000505804 BIN1O00499 593 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 CDC45O75419 566 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 RAPGEF3O95398 923 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 TACR1P25103 407 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 BCL6P41182 706 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 CYP4F8P98187 520 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 STYK1Q6J9G0 422 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 RSPO2Q6UXX9 243 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 PTPRN2Q92932 1015 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 CHAMP1Q96JM3 812 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 NCOA5Q9HCD5 579 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 GPR27Q9NS67 375 aa5.96□□□□□ -1.46
TOPBP1-204ENST00000505804 PAPLNO95428 1278 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 FUCA1P04066 466 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 GABREP78334 506 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 TKFCQ3LXA3 575 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 CEP68Q76N32 757 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 TEX2Q8IWB9 1127 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 SLC7A14Q8TBB6 771 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 USP33Q8TEY7 942 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 SLC52A2Q9HAB3 445 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 PDLIM7Q9NR12 457 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 MARCH2Q9P0N8 246 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 FBLN5Q9UBX5 448 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 NDOR1Q9UHB4 597 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 FBXL7Q9UJT9 491 aa5.95□□□□□ -1.46
TOPBP1-204ENST00000505804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 A0A1W2PQJ5 194 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 ENPP3O14638 875 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 PLD2O14939 933 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 MYO1BO43795 1136 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms