RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FAM50AQ14320 339 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 AXDND1Q5T1B0 1012 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 CNNM4Q6P4Q7 775 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 NSMFQ6X4W1 530 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 TMEM192Q8IY95 271 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 CCDC144CPQ8IYA2 1237 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 CCDC146Q8IYE0 955 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 AFAP1L2Q8N4X5 818 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 CRACR2BQ8N4Y2 399 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 RIN3Q8TB24 985 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 ABHD4Q8TB40 342 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 DDX1Q92499 740 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 KCNC2Q96PR1 638 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 FAM126AQ9BYI3 521 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 PRDM5Q9NQX1 630 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 C19orf73Q9NVV2 129 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 SUSD2Q9UGT4 822 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 SFMBT1Q9UHJ3 866 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 THRAP3Q9Y2W1 955 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 KIF3BO15066 747 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 EFCAB14O75071 495 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 LRIG2O94898 1065 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 UBOX5O94941 541 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 APPP05067 770 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 ITGAVP06756 1048 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 PABPC1P11940 636 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 GUCY2FP51841 1108 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 NKPD1Q17RQ9 610 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 ANKRD39Q53RE8 183 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 POMZP3Q6PJE2 187 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 NECAB2Q7Z6G3 386 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 ADAT2Q7Z6V5 191 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 PPFIBP1Q86W92 1011 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 ZNF227Q86WZ6 799 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 FOXQ1Q9C009 403 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 KCNK12Q9HB15 430 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 FAM86C1Q9NVL1 165 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 GABBR1Q9UBS5 961 aa5.19□□□□□ -1.58
TRAPPC13-208ENST00000505553 LOC102724159A0A0B4J2E5 919 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 FAM155AB1AL88 458 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 PRODHO43272 600 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 RASGRP1O95267 797 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 EOMESO95936 686 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 CELA3BP08861 270 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 NTF4P34130 210 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 FLT3P36888 993 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 CAP2P40123 477 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 GABREP78334 506 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 PWP2Q15269 919 aaKnown RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 TTF1Q15361 905 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 TRIM61Q5EBN2 209 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 YOD1Q5VVQ6 348 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 TCERG1LQ5VWI1 586 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 TDRD10Q5VZ19 366 aaKnown RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 ARMCX6Q7L4S7 300 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 UBE3DQ7Z6J8 389 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 BVESQ8NE79 360 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 MORC4Q8TE76 937 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 CYB5D2Q8WUJ1 264 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 LEO1Q8WVC0 666 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 KLHL25Q9H0H3 589 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 WHRNQ9P202 907 aa5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 TPX2Q9ULW0 747 aaKnown RBP5.18□□□□□ -1.58
TRAPPC13-208ENST00000505553 C9IYK1 514 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 PEX14O75381 377 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 SDSP20132 328 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 POU3F2P20265 443 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 KRTAP10-2P60368 255 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 NFE2Q16621 373 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 SKOR2Q2VWA4 1001 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 RNF219Q5W0B1 726 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 CCSAPQ6IQ19 270 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 TMEM151BQ8IW70 566 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 MARCH10Q8NA82 808 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 BAHD1Q8TBE0 780 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 RCC1LQ96I51 464 aaKnown RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 FGD4Q96M96 766 aa5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 MKRN2Q9H000 416 aaKnown RBP5.17□□□□□ -1.58
TRAPPC13-208ENST00000505553 CBFA2T2O43439 604 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 BRINP1O60477 761 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 EYA4O95677 639 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 CST3P01034 146 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 ASLP04424 464 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 ITGA4P13612 1032 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 NEK4P51957 841 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 RNF4P78317 190 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 PPP2R5AQ15172 486 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 DHCR24Q15392 516 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 WDR75Q8IWA0 830 aaKnown RBP5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 WDR66Q8TBY9 1149 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 OSBP2Q969R2 916 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 CCDC140Q96MF4 163 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 SLC5A4Q9NY91 659 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 APEX2Q9UBZ4 518 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 NDOR1Q9UHB4 597 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 AKT3Q9Y243 479 aa5.16□□□□□ -1.58
TRAPPC13-208ENST00000505553 A0A087WZG4 1122 aa5.15□□□□□ -1.58
TRAPPC13-208ENST00000505553 TSPAN6O43657 245 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms