RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 KRT31Q15323 416 aa8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 ZRSR2Q15696 482 aaKnown RBP8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 SMAD1Q15797 465 aaKnown RBP8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 STMN2Q93045 179 aa8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 STAMBPL1Q96FJ0 436 aa8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 L1RE1Q9UN81 338 aa8.61□□□□□ -1.03
ATP2C1-208ENST00000504948 TXKP42681 527 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 EVA1CP58658 441 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 PICALMQ13492 652 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 KCNB1Q14721 858 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 SCYL3Q8IZE3 742 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 RNF10Q8N5U6 811 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 GSDMBQ8TAX9 411 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 RAB3IL1Q8TBN0 382 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NOX5Q96PH1 765 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 ANKZF1Q9H8Y5 726 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 INTS9Q9NV88 658 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 TCEAL9Q9UHQ7 104 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 EDC4Q6P2E9 1401 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 TTC26A0AVF1 554 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 G3V3G9 751 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 ZRANB2O95218 330 aaKnown RBP eCLIP8.6□□□□□ -1.033e-6■■■■■ 27.8
ATP2C1-208ENST00000504948 ADORA1P30542 326 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 COPB2P35606 906 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 KLK7P49862 253 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 KCNQ4P56696 695 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 SLC39A14Q15043 492 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 DCAF8Q5TAQ9 597 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 SHC4Q6S5L8 630 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 CEP128Q6ZU80 1094 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 UTS2BQ765I0 119 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NLRP14Q86W24 1093 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.035e-6■■□□□ 13.8
ATP2C1-208ENST00000504948 MCUR1Q96AQ8 359 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 CEP63Q96MT8 703 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 NSRP1Q9H0G5 558 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 DLG5Q8TDM6 1919 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 KIF24Q5T7B8 1368 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 GOLGA8KD6RF30 607 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 MFAP3LO75121 409 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 TRIM65Q6PJ69 517 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 ZC3H18Q86VM9 953 aaKnown RBP8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 CCDC13Q8IYE1 715 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 KBTBD3Q8NAB2 608 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 HPCAL4Q9UM19 191 aa8.6□□□□□ -1.03
ATP2C1-208ENST00000504948 RFC1P35251 1148 aaPredicted RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 PTGDRQ13258 359 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 PPP2R5CQ13362 524 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 FAM47AQ5JRC9 791 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 POTEAQ6S8J7 498 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 CCDC197Q8NCU1 140 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 OXER1Q8TDS5 423 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 DONSONQ9NYP3 566 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 STAP2Q9UGK3 403 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ZNF711Q9Y462 761 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ZNF646O15015 1829 aaPredicted RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 MYBL2P10244 700 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 POLR2FP61218 127 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 GSTA5Q7RTV2 222 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 METTL16Q86W50 562 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 VPS52Q8N1B4 723 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 FAM184BQ9ULE4 1060 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 PP2D1A8MPX8 630 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 PPFIA2O75334 1257 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ACSL3O95573 720 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 SLC8A1P32418 973 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 LSP1P33241 339 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 RPS6KA1Q15418 735 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ZNF473Q8WTR7 871 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 SDR42E1Q8WUS8 393 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 HAUS4Q9H6D7 363 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ASIC3Q9UHC3 531 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 TRMT112Q9UI30 125 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ADCY9O60503 1353 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 STX2P32856 288 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 EIF4A3P38919 411 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 KLHL30Q0D2K2 578 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 ARHGAP44Q17R89 818 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 SLC9C1Q4G0N8 1177 aa8.59□□□□□ -1.03
ATP2C1-208ENST00000504948 CYP4F22Q6NT55 531 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms