RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 TMTC3Q6ZXV5 915 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 ZNF467Q7Z7K2 595 aaPredicted RBP23.4■■□□□ 1.34
HERC6-205ENST00000504905 CMTR1Q8N1G2 835 aaKnown RBP23.4■■□□□ 1.34
HERC6-205ENST00000504905 FAM133AQ8N9E0 248 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 ANKLE1Q8NAG6 615 aa23.4■■□□□ 1.34
HERC6-205ENST00000504905 RRP36Q96EU6 259 aaKnown RBP23.4■■□□□ 1.34
HERC6-205ENST00000504905 PPP1R11O60927 126 aaPredicted RBP23.39■■□□□ 1.33
HERC6-205ENST00000504905 BMP8BP34820 402 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 RNF207Q6ZRF8 634 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 MSL3Q8N5Y2 521 aaKnown RBP23.39■■□□□ 1.33
HERC6-205ENST00000504905 PDRG1Q9NUG6 133 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 SEC63Q9UGP8 760 aaKnown RBP23.39■■□□□ 1.33
HERC6-205ENST00000504905 PCDHA1Q9Y5I3 950 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 MCM3APO60318 1980 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 ALPK3Q96L96 1907 aa23.39■■□□□ 1.33
HERC6-205ENST00000504905 CCND3P30281 292 aaPredicted RBP23.38■■□□□ 1.33
HERC6-205ENST00000504905 METAP2P50579 478 aaKnown RBP eCLIP23.38■■□□□ 1.33
HERC6-205ENST00000504905 MCF2L2Q86YR7 1114 aa23.38■■□□□ 1.33
HERC6-205ENST00000504905 CCDC82Q8N4S0 544 aa23.38■■□□□ 1.33
HERC6-205ENST00000504905 GDF15Q99988 308 aa23.38■■□□□ 1.33
HERC6-205ENST00000504905 SYNGAP1Q96PV0 1343 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 DLL1O00548 723 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 CYBAP13498 195 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 CALML3P27482 149 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 CNGA1P29973 690 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 RPS6P62753 249 aaKnown RBP23.37■■□□□ 1.33
HERC6-205ENST00000504905 TOB2Q14106 344 aaPredicted RBP23.37■■□□□ 1.33
HERC6-205ENST00000504905 PPP2R5BQ15173 497 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 MAMDC4Q6UXC1 1216 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 SLC30A10Q6XR72 485 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 RGS22Q8NE09 1264 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 DIS3LQ8TF46 1054 aaKnown RBP23.37■■□□□ 1.33
HERC6-205ENST00000504905 IL17RAQ96F46 866 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 LRCH3Q96II8 777 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 FGD4Q96M96 766 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 MAF1Q9H063 256 aa23.37■■□□□ 1.33
HERC6-205ENST00000504905 CCDC196A0A1B0GTZ2 297 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 SOWAHBA6NEL2 793 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 PRAMEF19Q5SWL8 479 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 TRPV1Q8NER1 839 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 ADD3Q9UEY8 706 aaKnown RBP23.36■■□□□ 1.33
HERC6-205ENST00000504905 NRBP1Q9UHY1 535 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 CNPY2Q9Y2B0 182 aa23.36■■□□□ 1.33
HERC6-205ENST00000504905 ASB14A6NK59 587 aa23.35■■□□□ 1.33
HERC6-205ENST00000504905 CDC27P30260 824 aa23.35■■□□□ 1.33
HERC6-205ENST00000504905 GPR153Q6NV75 609 aa23.35■■□□□ 1.33
HERC6-205ENST00000504905 FAM217BQ9NTX9 383 aaPredicted RBP23.35■■□□□ 1.33
HERC6-205ENST00000504905 NID2Q14112 1375 aa23.35■■□□□ 1.33
HERC6-205ENST00000504905 CNTNAP5Q8WYK1 1306 aa23.34■■□□□ 1.33
HERC6-205ENST00000504905 FRMPD3Q5JV73 1810 aa23.34■■□□□ 1.33
HERC6-205ENST00000504905 EVCP57679 992 aa23.34■■□□□ 1.33
HERC6-205ENST00000504905 ARMCX2Q7L311 632 aa23.34■■□□□ 1.33
HERC6-205ENST00000504905 PURBQ96QR8 312 aaKnown RBP23.34■■□□□ 1.33
HERC6-205ENST00000504905 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.34■■□□□ 1.33
HERC6-205ENST00000504905 A0A0C4DFX4 3053 aa23.34■■□□□ 1.33
HERC6-205ENST00000504905 SNAI1O95863 264 aaPredicted RBP23.33■■□□□ 1.33
HERC6-205ENST00000504905 CFBP00751 764 aa23.33■■□□□ 1.33
HERC6-205ENST00000504905 PDIA3P30101 505 aaKnown RBP23.33■■□□□ 1.33
HERC6-205ENST00000504905 ADD1P35611 737 aaKnown RBP23.33■■□□□ 1.33
HERC6-205ENST00000504905 MNX1P50219 401 aaPredicted RBP23.33■■□□□ 1.33
HERC6-205ENST00000504905 C7orf61Q8IZ16 206 aa23.33■■□□□ 1.33
HERC6-205ENST00000504905 TBC1D5Q92609 795 aa23.33■■□□□ 1.33
HERC6-205ENST00000504905 ASTN1O14525 1302 aa23.33■■□□□ 1.32
HERC6-205ENST00000504905 hCG_1642624A0A1W2PR95 340 aa23.32■■□□□ 1.32
HERC6-205ENST00000504905 SEPT4O43236 478 aa23.32■■□□□ 1.32
HERC6-205ENST00000504905 MSCO60682 206 aa23.32■■□□□ 1.32
HERC6-205ENST00000504905 ALDH5A1P51649 535 aaPredicted RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 LARP6Q9BRS8 491 aaKnown RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 C22orf23Q9BZE7 217 aa23.32■■□□□ 1.32
HERC6-205ENST00000504905 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 DDX20Q9UHI6 824 aaKnown RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 ZHX1Q9UKY1 873 aaPredicted RBP23.32■■□□□ 1.32
HERC6-205ENST00000504905 LOC102724159A0A0B4J2E5 919 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 OPLAHO14841 1288 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 CCT2P78371 535 aaKnown RBP23.31■■□□□ 1.32
HERC6-205ENST00000504905 FUT2Q10981 343 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 PWP2Q15269 919 aaKnown RBP23.31■■□□□ 1.32
HERC6-205ENST00000504905 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 SAMD3Q8N6K7 520 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 DNERQ8NFT8 737 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 SYTL5Q8TDW5 730 aaPredicted RBP23.31■■□□□ 1.32
HERC6-205ENST00000504905 ZNF274Q96GC6 653 aaPredicted RBP23.31■■□□□ 1.32
HERC6-205ENST00000504905 MPHOSPH6Q99547 160 aaKnown RBP23.31■■□□□ 1.32
HERC6-205ENST00000504905 ABHD16BQ9H3Z7 469 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 OGDHLQ9ULD0 1010 aa23.31■■□□□ 1.32
HERC6-205ENST00000504905 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
HERC6-205ENST00000504905 ZNF865P0CJ78 1059 aaPredicted RBP23.3■■□□□ 1.32
HERC6-205ENST00000504905 HSD17B4P51659 736 aa23.3■■□□□ 1.32
HERC6-205ENST00000504905 ACVR2BQ13705 512 aa23.3■■□□□ 1.32
HERC6-205ENST00000504905 C11orf49Q9H6J7 331 aa23.3■■□□□ 1.32
HERC6-205ENST00000504905 MAP3K20Q9NYL2 800 aaKnown RBP23.3■■□□□ 1.32
HERC6-205ENST00000504905 ZMYND8Q9ULU4 1186 aaPredicted RBP23.3■■□□□ 1.32
HERC6-205ENST00000504905 V9GY48 417 aaPredicted RBP23.3■■□□□ 1.32
HERC6-205ENST00000504905 B4DLN1 442 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 GCOM1H8Y6P7 765 aaPredicted RBP23.29■■□□□ 1.32
HERC6-205ENST00000504905 POLR2MP0CAP2 368 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 NEK4P51957 841 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 MRPL12P52815 198 aaKnown RBP23.29■■□□□ 1.32
HERC6-205ENST00000504905 GHRHRQ02643 423 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms