RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 CSRNP1Q96S65 589 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 TRIM9Q9C026 710 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 ARHGAP6O43182 974 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 STX10O60499 249 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 PPP1R2P41236 205 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 PTPN21Q16825 1174 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 LRRC15Q8TF66 581 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 PPP1R13BQ96KQ4 1090 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 GMLQ99445 158 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
SNCAIP-207ENST00000504884 TEX33O43247 280 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 GH2P01242 217 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 PBX1P40424 430 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 DLGAP5Q15398 846 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 SV2BQ7L1I2 683 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 TC2NQ8N9U0 490 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 FAM151AQ8WW52 585 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 DHTKD1Q96HY7 919 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 BAG1Q99933 345 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.37
SNCAIP-207ENST00000504884 PSMD14O00487 310 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 PSMA7O14818 248 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 RAD17O75943 681 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 NDUFB10O96000 172 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 KCNA3P22001 575 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 USP11P51784 963 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 KRT79Q5XKE5 535 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 AMNQ9BXJ7 453 aa17.33■□□□□ 0.36
SNCAIP-207ENST00000504884 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 BMP3P12645 472 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 DPEP1P16444 411 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 GRB10Q13322 594 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 KRT31Q15323 416 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 TCP11X2Q5H9J9 407 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 PPFIBP1Q86W92 1011 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 TMEM139Q8IV31 216 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 KIF18AQ8NI77 898 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 CDK5RAP3Q96JB5 506 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 EXOC1Q9NV70 894 aa17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 ZNF70Q9UC06 446 aaPredicted RBP17.32■□□□□ 0.36
SNCAIP-207ENST00000504884 KCNJ18B7U540 433 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 TCP10L2B9ZVM9 353 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 N4BP3O15049 544 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 MARCH6O60337 910 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 COBLO75128 1261 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ADKP55263 362 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 PDE4DQ08499 809 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 GOLGA8FQ08AF8 430 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 GOLGA8DPQ0D2H9 430 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 KCNJ12Q14500 433 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 PANX2Q96RD6 677 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ITIH6Q6UXX5 1313 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 COPB1P53618 953 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ASIC1P78348 528 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 JAG1P78504 1218 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 FKBP1CQ5VVH2 108 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 PNMA5Q96PV4 448 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 ZNRF3Q9ULT6 936 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNCAIP-207ENST00000504884 PSME4Q14997 1843 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 CYP3A7P24462 503 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 HOXA7P31268 230 aaPredicted RBP17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 IKQ13123 557 aaPredicted RBP17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 COBLL1Q53SF7 1204 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 CNNM4Q6P4Q7 775 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 HAS1Q92839 578 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 THAP9Q9H5L6 903 aa17.3■□□□□ 0.36
SNCAIP-207ENST00000504884 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms