RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 A0A1W2PQ45 241 aaPredicted RBP16.57■□□□□ 0.24
HOXC9-202ENST00000504557 A0A1W2PQY0 241 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
HOXC9-202ENST00000504557 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 CFBP00751 764 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 ACLYP53396 1101 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
HOXC9-202ENST00000504557 PDE4DQ08499 809 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 GNASQ5JWF2 1037 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 TMEM63BQ5T3F8 832 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 PIGSQ96S52 555 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 AMNQ9BXJ7 453 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 PRKAG2Q9UGJ0 569 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
HOXC9-202ENST00000504557 DYNC1LI2O43237 492 aaPredicted RBP16.56■□□□□ 0.24
HOXC9-202ENST00000504557 SMPD1P17405 629 aa16.56■□□□□ 0.24
HOXC9-202ENST00000504557 MAGEA10P43363 369 aaPredicted RBP16.56■□□□□ 0.24
HOXC9-202ENST00000504557 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
HOXC9-202ENST00000504557 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
HOXC9-202ENST00000504557 AP5M1Q9H0R1 490 aa16.56■□□□□ 0.24
HOXC9-202ENST00000504557 STARD7Q9NQZ5 370 aa16.56■□□□□ 0.24
HOXC9-202ENST00000504557 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
HOXC9-202ENST00000504557 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
HOXC9-202ENST00000504557 LTBP2Q14767 1821 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-202ENST00000504557 ZBTB5O15062 677 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 PQBP1O60828 265 aaKnown RBP16.55■□□□□ 0.24
HOXC9-202ENST00000504557 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-202ENST00000504557 ASGR1P07306 291 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 TROAPQ12815 778 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
HOXC9-202ENST00000504557 TAAR1Q96RJ0 339 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 MPHOSPH6Q99547 160 aaKnown RBP16.55■□□□□ 0.24
HOXC9-202ENST00000504557 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 COL20A1Q9P218 1284 aa16.55■□□□□ 0.24
HOXC9-202ENST00000504557 CYTH3O43739 400 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 HOXA13P31271 388 aaPredicted RBP16.54■□□□□ 0.24
HOXC9-202ENST00000504557 GJA9P57773 515 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 MCF2L2Q86YR7 1114 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 RASEFQ8IZ41 740 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
HOXC9-202ENST00000504557 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 NEK1Q96PY6 1258 aa16.54■□□□□ 0.24
HOXC9-202ENST00000504557 UBE2OQ9C0C9 1292 aaKnown RBP16.54■□□□□ 0.24
HOXC9-202ENST00000504557 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
HOXC9-202ENST00000504557 DDAH1O94760 285 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 EIF2AK2P19525 551 aaKnown RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 TLE2Q04725 743 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 ARHGEF16Q5VV41 709 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 PCSK9Q8NBP7 692 aaKnown RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 GLT1D1Q96MS3 346 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 LBHD1Q9BQE6 289 aaPredicted RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 TSEN34Q9BSV6 310 aaKnown RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 WDR11Q9BZH6 1224 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 UPF3AQ9H1J1 476 aaKnown RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
HOXC9-202ENST00000504557 SLC12A7Q9Y666 1083 aa16.53■□□□□ 0.24
HOXC9-202ENST00000504557 MOXD2PA6NHM9 499 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 B4DLN1 442 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 CPA1P15085 419 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 KIF5BP33176 963 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
HOXC9-202ENST00000504557 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
HOXC9-202ENST00000504557 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 MORC4Q8TE76 937 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 COPS5Q92905 334 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 MTMR8Q96EF0 704 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 RMDN3Q96TC7 470 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 GDF15Q99988 308 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
HOXC9-202ENST00000504557 DOCK5Q9H7D0 1870 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 PNMA6FA0A0J9YX94 578 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 OPLAHO14841 1288 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
HOXC9-202ENST00000504557 CST5P28325 142 aaPredicted RBP16.51■□□□□ 0.23
HOXC9-202ENST00000504557 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
HOXC9-202ENST00000504557 FGD1P98174 961 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
HOXC9-202ENST00000504557 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 RGS22Q8NE09 1264 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
HOXC9-202ENST00000504557 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms