RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 SPAG1Q07617 926 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 RBBP5Q15291 538 aaKnown RBP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 SPA17Q15506 151 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 CDC37Q16543 378 aaPredicted RBP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 TRIM58Q8NG06 486 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 CABLES1Q8TDN4 633 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 PRCCQ92733 491 aaPredicted RBP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 UBAC1Q9BSL1 405 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 IFIH1Q9BYX4 1025 aaKnown RBP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 EBF2Q9HAK2 575 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 AATFQ9NY61 560 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 SLC12A7Q9Y666 1083 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 TACC3Q9Y6A5 838 aa15.69■□□□□ 0.1
COL6A4P2-202ENST00000504443 GOLGA6L10A6NI86 522 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 IL15P40933 162 aaPredicted RBP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 RWDD2BP57060 319 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 PAK2Q13177 524 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 HLTFQ14527 1009 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 EMC10Q5UCC4 262 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 FOXP1Q9H334 677 aaPredicted RBP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 HYOU1Q9Y4L1 999 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 LGALS16A8MUM7 142 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 EYA2O00167 538 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 SMNDC1O75940 238 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 HLFQ16534 295 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 DDX42Q86XP3 938 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 SPICE1Q8N0Z3 855 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 C3orf20Q8ND61 904 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 GDF3Q9NR23 364 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 NOVA2Q9UNW9 492 aaKnown RBP15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 MYH13Q9UKX3 1938 aa15.68■□□□□ 0.1
COL6A4P2-202ENST00000504443 MYH10P35580 1976 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 NUTM2BA6NNL0 878 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 NUTM2EB1AL46 878 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 GCOM1H8Y6P7 765 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 PECAM1P16284 738 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 MEA1Q16626 185 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 GKAP1Q5VSY0 366 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 CCDC63Q8NA47 563 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 ZNF507Q8TCN5 953 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 PCDHA13Q9Y5I0 950 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 IFIT3O14879 490 aaKnown RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 IFNAR1P17181 557 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 ICA1Q05084 483 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 LACTB2Q53H82 288 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 ZSWIM5Q9P217 1185 aa15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 PACSIN2Q9UNF0 486 aaPredicted RBP15.67■□□□□ 0.1
COL6A4P2-202ENST00000504443 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 DNAJC8O75937 253 aaPredicted RBP15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 RPS6KA3P51812 740 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 TLR10Q9BXR5 811 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 BATF3Q9NR55 127 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 C5P01031 1676 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 TRIM75PA6NK02 468 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 A8MUI8 341 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 HSD17B3P37058 310 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 RAB27AP51159 221 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 KRT28Q7Z3Y7 464 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 CD302Q8IX05 232 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 LTN1O94822 1766 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 STK36Q9NRP7 1315 aa15.66■□□□□ 0.1
COL6A4P2-202ENST00000504443 AFDNP55196 1824 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 USO1O60763 962 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 PRDM1O75626 825 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 TRIM37O94972 964 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 LINGO3P0C6S8 592 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 TCP1P17987 556 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 NBPF9Q3BBW0 867 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 ZNF572Q7Z3I7 529 aaPredicted RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 CCDC47Q96A33 483 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 ACSBG1Q96GR2 724 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 SSR1P43307 286 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 MAGOHP61326 146 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 KCNV2Q8TDN2 545 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 MAGOHBQ96A72 148 aaKnown RBP15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 STRCP1A6NGW2 1772 aa15.65■□□□□ 0.1
COL6A4P2-202ENST00000504443 CCT8L1PA6NM43 557 aa15.64■□□□□ 0.09
COL6A4P2-202ENST00000504443 ZFYP08048 801 aaPredicted RBP15.64■□□□□ 0.09
COL6A4P2-202ENST00000504443 KCNJ2P63252 427 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms