RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PLEKHG1Q9ULL1 1385 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 TOPBP1Q92547 1522 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 SLFN14P0C7P3 912 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 SDSP20132 328 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 FSCBQ5H9T9 825 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 NEK9Q8TD19 979 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 ARHGEF11O15085 1522 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 NEXMIFQ5QGS0 1516 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 H3BNX3 289 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 TTC4O95801 387 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 FLOT2Q14254 428 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PCGF5Q86SE9 256 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CHMP6Q96FZ7 201 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CARD10Q9BWT7 1032 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 HDAC6Q9UBN7 1215 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 GUCA1BQ9UMX6 200 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 SQORQ9Y6N5 450 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 KDM3AQ9Y4C1 1321 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CLTCL1P53675 1640 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CES2O00748 559 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CCDC159P0C7I6 412 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 BCRP11274 1271 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CCZ1BP86790 482 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CCZ1P86791 482 aaPredicted RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PPP2R5CQ13362 524 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PLEKHO1Q53GL0 409 aaPredicted RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 KDM7AQ6ZMT4 941 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 MAGEE1Q9HCI5 957 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 STK17AQ9UEE5 414 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 LIMA1Q9UHB6 759 aaKnown RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 TMED5Q9Y3A6 229 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PDS5AQ29RF7 1337 aaKnown RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PRLRP16471 622 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 GRIN1Q05586 938 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 ICA1LQ8NDH6 482 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 AK8Q96MA6 479 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 NR1H4Q96RI1 486 aaPredicted RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 AIPL1Q9NZN9 384 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 VHLP40337 213 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 CDCA5Q96FF9 252 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 MPP4Q96JB8 637 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 ZFATQ9P243 1243 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 PNMA2Q9UL42 364 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 RWDD3Q9Y3V2 267 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 METAP2P50579 478 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 ZFAND2BQ8WV99 257 aa6.62□□□□□ -1.35
LINC02397-201ENST00000504409 UPF3AQ9H1J1 476 aaKnown RBP6.62□□□□□ -1.35
LINC02397-201ENST00000504409 GOLGA8CPA6NN73 597 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 PGRMC1O00264 195 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 AGTP01019 485 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 RHOXF2BP0C7M4 288 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 GNA11P29992 359 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 AARSP49588 968 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 IFT88Q13099 833 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 RHOXF2Q9BQY4 288 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 IMPG2Q9BZV3 1241 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 APOBEC2Q9Y235 224 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 USP19O94966 1318 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 KLHL33A6NCF5 533 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 GCLCP48506 637 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 PREPLQ4J6C6 727 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ZNF579Q8NAF0 562 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 SCFD1Q8WVM8 642 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 RSPH1Q8WYR4 309 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 CEP19Q96LK0 163 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ROPN1BQ9BZX4 212 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ROPN1Q9HAT0 212 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ECE1P42892 770 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 FBLN2P98095 1184 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 LIN9Q5TKA1 542 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 KRT7P08729 469 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 DHX34Q14147 1143 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 TRMT2AQ8IZ69 625 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 TSC22D4Q9Y3Q8 395 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 OTUD6AQ7L8S5 288 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 AACSQ86V21 672 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 TRERF1Q96PN7 1200 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 LRRC37BQ96QE4 947 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 TRPC7Q9HCX4 862 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ABCB11O95342 1321 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 CALUO43852 315 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 MAPRE2Q15555 327 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 SPATA21Q7Z572 469 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 MIEF2Q96C03 454 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 METTL14Q9HCE5 456 aaKnown RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 TCHHQ07283 1943 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 CHMP2AO43633 222 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 CALB2P22676 271 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 FRMD8Q9BZ67 464 aaPredicted RBP6.61□□□□□ -1.35
LINC02397-201ENST00000504409 DCLRE1BQ9H816 532 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 RTEL1Q9NZ71 1219 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 ATP6V0A2Q9Y487 856 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 DEXIO95424 95 aa6.61□□□□□ -1.35
LINC02397-201ENST00000504409 CHRM1P11229 460 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms