RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 USP6NLQ92738 828 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 LLPHQ9BRT6 129 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 SRRDQ9UH36 339 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 KCNJ14Q9UNX9 436 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 SMCO2A6NFE2 343 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 POTEB2H3BUK9 544 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 STRNO43815 780 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 HOXD10P28358 340 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 CCL14Q16627 93 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 USP17L6PQ6QN14 398 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 DPP9Q86TI2 863 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 RBM27Q9P2N5 1060 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-212ENST00000504380 LCTP09848 1927 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 ADCY7P51828 1080 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 SOX10P56693 466 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 GUCY1B3Q02153 619 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 TRAF1Q13077 416 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 CTU1Q7Z7A3 348 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 ABRAQ8N0Z2 381 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 FGD4Q96M96 766 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 FLRT1Q9NZU1 646 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 SMC3Q9UQE7 1217 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 PTCH2Q9Y6C5 1203 aa15.26■□□□□ 0.03
PDLIM7-212ENST00000504380 ASTN1O14525 1302 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 PFASO15067 1338 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 MEIS2O14770 477 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 ELNP15502 786 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 GJB2P29033 226 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 RGS2P41220 211 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 HSD17B4P51659 736 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 NLRP5P59047 1200 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 ARHGEF6Q15052 776 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 FAM184AQ8NB25 1140 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 RAET1EQ8TD07 263 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 BIN2Q9UBW5 565 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 RBBP6Q7Z6E9 1792 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 PLXNA1Q9UIW2 1896 aa15.25■□□□□ 0.03
PDLIM7-212ENST00000504380 hCG_1984214I3L0E3 225 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 GNRH1P01148 92 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 UBXN2AP68543 259 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 HMGN5P82970 282 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 TRIM32Q13049 653 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 PPP1R18Q6NYC8 613 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 ZNF713Q8N859 430 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 WASF1Q92558 559 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 ZNF236Q9UL36 1845 aa15.24■□□□□ 0.03
PDLIM7-212ENST00000504380 ADCY3O60266 1144 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 TRIB2Q92519 343 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 CUL5Q93034 780 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 MAML3Q96JK9 1138 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 APBA2Q99767 749 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 PHF20Q9BVI0 1012 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 ZMYND12Q9H0C1 365 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 C6orf50Q9HD87 102 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.23■□□□□ 0.03
PDLIM7-212ENST00000504380 ESYT2A0FGR8 921 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 HOXC6P09630 235 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 EIF2AK2P19525 551 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 CYP2C19P33261 490 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 ALDH5A1P51649 535 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 MRPL12P52815 198 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 GHRHRQ02643 423 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 IRF5Q13568 498 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 NPY5RQ15761 445 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 PRAMEF19Q5SWL8 479 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 KRT40Q6A162 431 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 CCDC148Q8NFR7 591 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 OXER1Q8TDS5 423 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 SH3TC2Q8TF17 1288 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 CCDC12Q8WUD4 166 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 PCDHA6Q9UN73 950 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms