RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 WDR19Q8NEZ3 1342 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 DCDC2CA8MYV0 355 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 ARVCFO00192 962 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 RAG1P15918 1043 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 SEC23AQ15436 765 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 CDC37Q16543 378 aaPredicted RBP19.03■□□□□ 0.64
SCLT1-204ENST00000503215 CCDC178Q5BJE1 867 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 STAG2Q8N3U4 1231 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 SENP2Q9HC62 589 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 VAT1LQ9HCJ6 419 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 VTA1Q9NP79 307 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 TBX21Q9UL17 535 aa19.03■□□□□ 0.64
SCLT1-204ENST00000503215 CYP21A2P08686 494 aa19.02■□□□□ 0.64
SCLT1-204ENST00000503215 SKAP1Q86WV1 359 aa19.02■□□□□ 0.64
SCLT1-204ENST00000503215 UBAC1Q9BSL1 405 aa19.02■□□□□ 0.64
SCLT1-204ENST00000503215 AP5M1Q9H0R1 490 aa19.02■□□□□ 0.64
SCLT1-204ENST00000503215 JMJD4Q9H9V9 463 aa19.02■□□□□ 0.64
SCLT1-204ENST00000503215 ADD3Q9UEY8 706 aaKnown RBP19.02■□□□□ 0.64
SCLT1-204ENST00000503215 A0A0U1RQG5 324 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-204ENST00000503215 PARP1P09874 1014 aaKnown RBP19.01■□□□□ 0.63
SCLT1-204ENST00000503215 PSMC6P62333 389 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 QRICH1Q2TAL8 776 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 ASPRV1Q53RT3 343 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 FAM126BQ8IXS8 530 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 WDR11Q9BZH6 1224 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 CNNM2Q9H8M5 875 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 COL20A1Q9P218 1284 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 RAD50Q92878 1312 aa19.01■□□□□ 0.63
SCLT1-204ENST00000503215 RBM47A0AV96 593 aaKnown RBP19■□□□□ 0.63
SCLT1-204ENST00000503215 NT5C2P49902 561 aa19■□□□□ 0.63
SCLT1-204ENST00000503215 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
SCLT1-204ENST00000503215 DUSP28Q4G0W2 176 aa19■□□□□ 0.63
SCLT1-204ENST00000503215 IFIT1BQ5T764 474 aaKnown RBP19■□□□□ 0.63
SCLT1-204ENST00000503215 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
SCLT1-204ENST00000503215 FAM161BQ96MY7 647 aa19■□□□□ 0.63
SCLT1-204ENST00000503215 SGSM2O43147 1006 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 TIMP1P01033 207 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 EDNRBP24530 442 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 CHST3Q7LGC8 479 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 SLC43A3Q8NBI5 491 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 RUFY2Q8WXA3 655 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 COPS5Q92905 334 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 TAAR1Q96RJ0 339 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 PNMA2Q9UL42 364 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 Q9Y3F1 56 aa18.99■□□□□ 0.63
SCLT1-204ENST00000503215 DHX16O60231 1041 aaKnown RBP18.98■□□□□ 0.63
SCLT1-204ENST00000503215 PPP1R11O60927 126 aaPredicted RBP18.98■□□□□ 0.63
SCLT1-204ENST00000503215 CD4P01730 458 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 FPGSQ05932 587 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 PDE4DQ08499 809 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 ITGA7Q13683 1181 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 RGS22Q8NE09 1264 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 SYTL5Q8TDW5 730 aaPredicted RBP18.98■□□□□ 0.63
SCLT1-204ENST00000503215 PPP1R13LQ8WUF5 828 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 PPP1R12CQ9BZL4 782 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 TRPV6Q9H1D0 765 aa18.98■□□□□ 0.63
SCLT1-204ENST00000503215 CYP2C18P33260 490 aa18.97■□□□□ 0.63
SCLT1-204ENST00000503215 COL9A3Q14050 684 aaPredicted RBP18.97■□□□□ 0.63
SCLT1-204ENST00000503215 GUCD1Q96NT3 240 aa18.97■□□□□ 0.63
SCLT1-204ENST00000503215 MAD2L2Q9UI95 211 aa18.97■□□□□ 0.63
SCLT1-204ENST00000503215 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
SCLT1-204ENST00000503215 MROH7Q68CQ1 1323 aa18.97■□□□□ 0.63
SCLT1-204ENST00000503215 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 PALM3A6NDB9 673 aaPredicted RBP18.96■□□□□ 0.63
SCLT1-204ENST00000503215 KLRF2D3W0D1 207 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 E7EWF7 191 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 OPLAHO14841 1288 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 ARIH2O95376 493 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
SCLT1-204ENST00000503215 MFSD5Q6N075 450 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 FBXO11Q86XK2 927 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 DNERQ8NFT8 737 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 RNPC3Q96LT9 517 aaKnown RBP18.96■□□□□ 0.63
SCLT1-204ENST00000503215 ABCB11O95342 1321 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 UMODL1Q5DID0 1318 aa18.96■□□□□ 0.63
SCLT1-204ENST00000503215 IFIT3O14879 490 aaKnown RBP18.95■□□□□ 0.62
SCLT1-204ENST00000503215 CABYRO75952 493 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 ACRP10323 421 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 CSF2RAP15509 400 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 ANTXR2P58335 489 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 FAM109BQ6ICB4 259 aaPredicted RBP18.95■□□□□ 0.62
SCLT1-204ENST00000503215 OR6J1Q8NGC5 347 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 MAP4K1Q92918 833 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 MTMR8Q96EF0 704 aa18.95■□□□□ 0.62
SCLT1-204ENST00000503215 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCLT1-204ENST00000503215 GPHNQ9NQX3 736 aaPredicted RBP18.95■□□□□ 0.62
SCLT1-204ENST00000503215 ZEB2O60315 1214 aa18.94■□□□□ 0.62
SCLT1-204ENST00000503215 B4GALT4O60513 344 aa18.94■□□□□ 0.62
SCLT1-204ENST00000503215 MYL3P08590 195 aa18.94■□□□□ 0.62
SCLT1-204ENST00000503215 TRDNQ13061 729 aa18.94■□□□□ 0.62
SCLT1-204ENST00000503215 STXBP5LQ9Y2K9 1186 aa18.94■□□□□ 0.62
SCLT1-204ENST00000503215 RBM8AQ9Y5S9 174 aaKnown RBP18.94■□□□□ 0.62
SCLT1-204ENST00000503215 BAZ2BQ9UIF8 2168 aaKnown RBP18.94■□□□□ 0.62
SCLT1-204ENST00000503215 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 TXNP10599 105 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 PURAQ00577 322 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 GRM4Q14833 912 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms