RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ARVCFO00192 962 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ZEB2O60315 1214 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 TIMP1P01033 207 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ICAM1P05362 532 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 EPHB4P54760 987 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 SMAD3P84022 425 aaKnown RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 AAMPQ13685 434 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 UPF3AQ9H1J1 476 aaKnown RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ADD3Q9UEY8 706 aaKnown RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 DDX49Q9Y6V7 483 aaKnown RBP12.62□□□□□ -0.39
SNCA-207ENST00000502987 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
SNCA-207ENST00000502987 ZNF213O14771 459 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 FGRP09769 529 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 CDK7P50613 346 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 AKNAD1Q5T1N1 836 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 TICAM2Q86XR7 235 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 FBXO16Q8IX29 292 aaPredicted RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 PURBQ96QR8 312 aaKnown RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 KATNBL1Q9H079 304 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 RNF41Q9H4P4 317 aaPredicted RBP12.61□□□□□ -0.39
SNCA-207ENST00000502987 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 DIAPH3Q9NSV4 1193 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 UNC80Q8N2C7 3258 aa12.61□□□□□ -0.39
SNCA-207ENST00000502987 SMPD1P17405 629 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 SDSP20132 328 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 CALML3P27482 149 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNCA-207ENST00000502987 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
SNCA-207ENST00000502987 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 TMEM199Q8N511 208 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 ESR2Q92731 530 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 TTC14Q96N46 770 aa12.6□□□□□ -0.39
SNCA-207ENST00000502987 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
SNCA-207ENST00000502987 RANBP17Q9H2T7 1088 aaKnown RBP12.6□□□□□ -0.39
SNCA-207ENST00000502987 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
SNCA-207ENST00000502987 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
SNCA-207ENST00000502987 NFIBO00712 420 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 CABYRO75952 493 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 PCP11498 1178 aaKnown RBP12.59□□□□□ -0.39
SNCA-207ENST00000502987 NOVP48745 357 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 ITGA7Q13683 1181 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
SNCA-207ENST00000502987 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNCA-207ENST00000502987 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 ASTN1O14525 1302 aa12.59□□□□□ -0.39
SNCA-207ENST00000502987 RIOK3O14730 519 aaKnown RBP12.58□□□□□ -0.4
SNCA-207ENST00000502987 CTAGE5O15320 804 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
SNCA-207ENST00000502987 IGHDP01880 384 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 ACRP10323 421 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 PDHBP11177 359 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 CSF2RAP15509 400 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 PTGS1P23219 599 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 CYP2C18P33260 490 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
SNCA-207ENST00000502987 PDE4DQ08499 809 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 USH1GQ495M9 461 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 TAPT1Q6NXT6 567 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNCA-207ENST00000502987 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 WDR11Q9BZH6 1224 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
SNCA-207ENST00000502987 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 GNEQ9Y223 722 aaKnown RBP12.58□□□□□ -0.4
SNCA-207ENST00000502987 MYH6P13533 1939 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 ZMYM6O95789 1325 aa12.58□□□□□ -0.4
SNCA-207ENST00000502987 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 LCTP09848 1927 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 B4DLN1 442 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 HIP1O00291 1037 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 MYL3P08590 195 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms