RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SYNGAP1Q96PV0 1343 aa29.02■■■□□ 2.24
LSM6-202ENST00000502781 HSD17B4P51659 736 aa29.01■■■□□ 2.24
LSM6-202ENST00000502781 IL27Q8NEV9 243 aa29.01■■■□□ 2.24
LSM6-202ENST00000502781 PURBQ96QR8 312 aaKnown RBP29.01■■■□□ 2.24
LSM6-202ENST00000502781 UNC93B1Q9H1C4 597 aa29.01■■■□□ 2.24
LSM6-202ENST00000502781 PLXNA1Q9UIW2 1896 aa29.01■■■□□ 2.23
LSM6-202ENST00000502781 PRPF3O43395 683 aaKnown RBP29.01■■■□□ 2.23
LSM6-202ENST00000502781 CCL5P13501 91 aa29.01■■■□□ 2.23
LSM6-202ENST00000502781 SCRN1Q12765 414 aa29.01■■■□□ 2.23
LSM6-202ENST00000502781 STK3Q13188 491 aa29.01■■■□□ 2.23
LSM6-202ENST00000502781 SYTL5Q8TDW5 730 aaPredicted RBP29.01■■■□□ 2.23
LSM6-202ENST00000502781 SLKQ9H2G2 1235 aaPredicted RBP29.01■■■□□ 2.23
LSM6-202ENST00000502781 PAK6Q9NQU5 681 aaPredicted RBP29.01■■■□□ 2.23
LSM6-202ENST00000502781 KIAA0100Q14667 2235 aaKnown RBP29■■■□□ 2.23
LSM6-202ENST00000502781 CYBAP13498 195 aa29■■■□□ 2.23
LSM6-202ENST00000502781 CALML3P27482 149 aa29■■■□□ 2.23
LSM6-202ENST00000502781 ME3Q16798 604 aa29■■■□□ 2.23
LSM6-202ENST00000502781 RNF26Q9BY78 433 aaPredicted RBP29■■■□□ 2.23
LSM6-202ENST00000502781 RBM27Q9P2N5 1060 aaKnown RBP29■■■□□ 2.23
LSM6-202ENST00000502781 NRBP1Q9UHY1 535 aa29■■■□□ 2.23
LSM6-202ENST00000502781 LCTP09848 1927 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 LOC102724159A0A0B4J2E5 919 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 hCG_1984214I3L0E3 225 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 SNAI1O95863 264 aaPredicted RBP28.99■■■□□ 2.23
LSM6-202ENST00000502781 PWP2Q15269 919 aaKnown RBP28.99■■■□□ 2.23
LSM6-202ENST00000502781 WWC2Q6AWC2 1192 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 ZNF713Q8N859 430 aaPredicted RBP28.99■■■□□ 2.23
LSM6-202ENST00000502781 DNERQ8NFT8 737 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 MORC4Q8TE76 937 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 PHKBQ93100 1093 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 HMX1Q9NP08 348 aaPredicted RBP28.99■■■□□ 2.23
LSM6-202ENST00000502781 COL20A1Q9P218 1284 aa28.99■■■□□ 2.23
LSM6-202ENST00000502781 ADD3Q9UEY8 706 aaKnown RBP28.99■■■□□ 2.23
LSM6-202ENST00000502781 CCDC85CA6NKD9 419 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 LARGE1O95461 756 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 CFBP00751 764 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 PKN1Q16512 942 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 PFKFB3Q16875 520 aaPredicted RBP28.98■■■□□ 2.23
LSM6-202ENST00000502781 TRPV1Q8NER1 839 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 RNF208Q9H0X6 261 aa28.98■■■□□ 2.23
LSM6-202ENST00000502781 ASB14A6NK59 587 aa28.97■■■□□ 2.23
LSM6-202ENST00000502781 MYCP01106 439 aaPredicted RBP28.97■■■□□ 2.23
LSM6-202ENST00000502781 ALDH5A1P51649 535 aaPredicted RBP28.97■■■□□ 2.23
LSM6-202ENST00000502781 ARMCX2Q7L311 632 aa28.97■■■□□ 2.23
LSM6-202ENST00000502781 HEATR3Q7Z4Q2 680 aa28.97■■■□□ 2.23
LSM6-202ENST00000502781 GPKOWQ92917 476 aaPredicted RBP eCLIP28.97■■■□□ 2.23
LSM6-202ENST00000502781 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.97■■■□□ 2.23
LSM6-202ENST00000502781 CPLX1O14810 134 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 GJB1P08034 283 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 SCG2P13521 617 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 CCND3P30281 292 aaPredicted RBP28.96■■■□□ 2.23
LSM6-202ENST00000502781 TYW1BQ6NUM6 668 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 NOL8Q76FK4 1167 aaKnown RBP28.96■■■□□ 2.23
LSM6-202ENST00000502781 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.96■■■□□ 2.23
LSM6-202ENST00000502781 BARHL2Q9NY43 387 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 LIMCH1Q9UPQ0 1083 aa28.96■■■□□ 2.23
LSM6-202ENST00000502781 GCOM1H8Y6P7 765 aaPredicted RBP28.95■■■□□ 2.22
LSM6-202ENST00000502781 POLR2MP0CAP2 368 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 EDNRBP24530 442 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 PPP1R18Q6NYC8 613 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 GTF3C6Q969F1 213 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 TAAR1Q96RJ0 339 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 TMEM106CQ9BVX2 250 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 SLC26A6Q9BXS9 759 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 KATNBL1Q9H079 304 aa28.95■■■□□ 2.22
LSM6-202ENST00000502781 RBBP6Q7Z6E9 1792 aaKnown RBP28.95■■■□□ 2.22
LSM6-202ENST00000502781 STXBP3O00186 592 aa28.94■■■□□ 2.22
LSM6-202ENST00000502781 PIK3CDO00329 1044 aa28.94■■■□□ 2.22
LSM6-202ENST00000502781 ZNF865P0CJ78 1059 aaPredicted RBP28.94■■■□□ 2.22
LSM6-202ENST00000502781 PRAMEF19Q5SWL8 479 aa28.94■■■□□ 2.22
LSM6-202ENST00000502781 CPLX2Q6PUV4 134 aaKnown RBP28.94■■■□□ 2.22
LSM6-202ENST00000502781 MEIS2O14770 477 aa28.93■■■□□ 2.22
LSM6-202ENST00000502781 PPFIA3O75145 1194 aa28.93■■■□□ 2.22
LSM6-202ENST00000502781 HOXA13P31271 388 aaPredicted RBP28.93■■■□□ 2.22
LSM6-202ENST00000502781 TEX2Q8IWB9 1127 aa28.93■■■□□ 2.22
LSM6-202ENST00000502781 ABHD16BQ9H3Z7 469 aa28.93■■■□□ 2.22
LSM6-202ENST00000502781 CNPY2Q9Y2B0 182 aa28.93■■■□□ 2.22
LSM6-202ENST00000502781 CTDNEP1O95476 244 aa28.92■■■□□ 2.22
LSM6-202ENST00000502781 AKAP17AQ02040 695 aaKnown RBP28.92■■■□□ 2.22
LSM6-202ENST00000502781 SSRP1Q08945 709 aaKnown RBP28.92■■■□□ 2.22
LSM6-202ENST00000502781 TRIM22Q8IYM9 498 aa28.92■■■□□ 2.22
LSM6-202ENST00000502781 NECAB1Q8N987 351 aa28.92■■■□□ 2.22
LSM6-202ENST00000502781 NSUN6Q8TEA1 469 aaKnown RBP28.92■■■□□ 2.22
LSM6-202ENST00000502781 RMDN3Q96TC7 470 aa28.92■■■□□ 2.22
LSM6-202ENST00000502781 PSTPIP2Q9H939 334 aa28.92■■■□□ 2.22
LSM6-202ENST00000502781 DDX49Q9Y6V7 483 aaKnown RBP28.92■■■□□ 2.22
LSM6-202ENST00000502781 POTEFA5A3E0 1075 aa28.91■■■□□ 2.22
LSM6-202ENST00000502781 CDKL5O76039 1030 aa28.91■■■□□ 2.22
LSM6-202ENST00000502781 ST3GAL1Q11201 340 aa28.91■■■□□ 2.22
LSM6-202ENST00000502781 SEPT4O43236 478 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 ST18O60284 1047 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 GJA8P48165 433 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 NAPAP54920 295 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 ACVR2BQ13705 512 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 LHX8Q68G74 356 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 USP17L6PQ6QN14 398 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 U2AF1L4Q8WU68 220 aaKnown RBP28.9■■■□□ 2.22
LSM6-202ENST00000502781 ZSCAN31Q96LW9 406 aaPredicted RBP28.9■■■□□ 2.22
LSM6-202ENST00000502781 DEFB118Q96PH6 123 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 CRISPLD2Q9H0B8 497 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms