RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 MCMBPQ9BTE3 642 aa7.36□□□□□ -1.23
CCSER1-202ENST00000502478 BDH2Q9BUT1 245 aa7.36□□□□□ -1.23
CCSER1-202ENST00000502478 KLHL25Q9H0H3 589 aa7.36□□□□□ -1.23
CCSER1-202ENST00000502478 DDX41Q9UJV9 622 aaKnown RBP7.36□□□□□ -1.23
CCSER1-202ENST00000502478 A0A1B0GTL3 188 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 MC3RP41968 323 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 ADGRG2Q8IZP9 1017 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 ALG3Q92685 438 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 SLC12A7Q9Y666 1083 aa7.35□□□□□ -1.23
CCSER1-202ENST00000502478 PLP2Q04941 152 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 SPATS1Q496A3 300 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 CCDC81Q6ZN84 652 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 GGNQ86UU5 652 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 CABP7Q86V35 215 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 C19orf47Q8N9M1 422 aaKnown RBP7.34□□□□□ -1.23
CCSER1-202ENST00000502478 NETO2Q8NC67 525 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
CCSER1-202ENST00000502478 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 GBP3Q9H0R5 595 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 PHAXQ9H814 394 aaKnown RBP7.34□□□□□ -1.23
CCSER1-202ENST00000502478 GINM1Q9NU53 330 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 FBLN5Q9UBX5 448 aa7.34□□□□□ -1.23
CCSER1-202ENST00000502478 STXBP3O00186 592 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 PMLP29590 882 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 TRIM26Q12899 539 aaPredicted RBP7.33□□□□□ -1.24
CCSER1-202ENST00000502478 GNPTABQ3T906 1256 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 NT5DC1Q5TFE4 455 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 LZTR1Q8N653 840 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 USP40Q9NVE5 1235 aa7.33□□□□□ -1.24
CCSER1-202ENST00000502478 CNOT11Q9UKZ1 510 aaKnown RBP7.33□□□□□ -1.24
CCSER1-202ENST00000502478 SOX9P48436 509 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 HEATR6Q6AI08 1181 aaKnown RBP7.32□□□□□ -1.24
CCSER1-202ENST00000502478 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 CRBNQ96SW2 442 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 MTA3Q9BTC8 594 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 CGGBP1Q9UFW8 167 aaPredicted RBP7.32□□□□□ -1.24
CCSER1-202ENST00000502478 RWDD3Q9Y3V2 267 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 BACE2Q9Y5Z0 518 aa7.32□□□□□ -1.24
CCSER1-202ENST00000502478 CCDC180Q9P1Z9 1646 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 EPHX1P07099 455 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 GIPRP48546 466 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 SEPHS1P49903 392 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 SLC7A5Q01650 507 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 PAK2Q13177 524 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 GRB10Q13322 594 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 SLC9A5Q14940 896 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 CARFQ8N187 725 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 SPATA32Q96LK8 384 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 BCAS3Q9H6U6 928 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 NUDT5Q9UKK9 219 aa7.31□□□□□ -1.24
CCSER1-202ENST00000502478 A0A1W2PQH9 124 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 PPP1R11O60927 126 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-202ENST00000502478 VAMP4O75379 141 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 PPM1BO75688 479 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 EIF6P56537 245 aaKnown RBP7.3□□□□□ -1.24
CCSER1-202ENST00000502478 DPY19L1Q2PZI1 675 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 UBXN11Q5T124 520 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 ZNF654Q8IZM8 581 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 OR6P1Q8NGX9 317 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 SMARCC2Q8TAQ2 1214 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 KLHL6Q8WZ60 621 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 RCC1LQ96I51 464 aaKnown RBP7.3□□□□□ -1.24
CCSER1-202ENST00000502478 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 EFR3BQ9Y2G0 817 aa7.3□□□□□ -1.24
CCSER1-202ENST00000502478 C2orf71A6NGG8 1288 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 NOBOXO60393 691 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 AMPD2Q01433 879 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
CCSER1-202ENST00000502478 RASGRP4Q8TDF6 673 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 FGD4Q96M96 766 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 GULP1Q9UBP9 304 aa7.29□□□□□ -1.24
CCSER1-202ENST00000502478 TRBV23OR9-2A0A075B6M9 112 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 RECKO95980 971 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 PAMP19021 973 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 RBM10P98175 930 aaKnown RBP7.28□□□□□ -1.24
CCSER1-202ENST00000502478 CACNB2Q08289 660 aaPredicted RBP7.28□□□□□ -1.24
CCSER1-202ENST00000502478 WWC2Q6AWC2 1192 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 HHIPL2Q6UWX4 724 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 FERMT3Q86UX7 667 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 CPNE8Q86YQ8 564 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
CCSER1-202ENST00000502478 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.25
CCSER1-202ENST00000502478 K7ESM1 405 aa7.27□□□□□ -1.25
CCSER1-202ENST00000502478 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
CCSER1-202ENST00000502478 LNPKQ9C0E8 428 aa7.27□□□□□ -1.25
CCSER1-202ENST00000502478 SPATA6Q9NWH7 488 aaPredicted RBP7.27□□□□□ -1.25
CCSER1-202ENST00000502478 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.27□□□□□ -1.25
CCSER1-202ENST00000502478 NTMQ9P121 344 aa7.27□□□□□ -1.25
CCSER1-202ENST00000502478 DUSP10Q9Y6W6 482 aa7.27□□□□□ -1.25
CCSER1-202ENST00000502478 C7orf72A4D263 438 aa7.26□□□□□ -1.25
CCSER1-202ENST00000502478 VAMP1P23763 118 aa7.26□□□□□ -1.25
CCSER1-202ENST00000502478 GJA9P57773 515 aa7.26□□□□□ -1.25
CCSER1-202ENST00000502478 ZXDCQ2QGD7 858 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms