RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 GRIA2P42262 883 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 WNT7BP56706 349 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 SCAND1P57086 179 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 PPP2R2AP63151 447 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 HMGN5P82970 282 aaKnown RBP4.32□□□□□ -1.72
SUB1-202ENST00000502453 PFKPQ01813 784 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 NCAPHQ15003 741 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 ANKRD18AQ8IVF6 992 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 ESX1Q8N693 406 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 ZNF784Q8NCA9 323 aaPredicted RBP4.32□□□□□ -1.72
SUB1-202ENST00000502453 ZNF669Q96BR6 464 aaPredicted RBP4.32□□□□□ -1.72
SUB1-202ENST00000502453 FAXDC2Q96IV6 333 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 TAAR9Q96RI9 348 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 SIL1Q9H173 461 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 FAM204AQ9H8W3 233 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 GRPEL1Q9HAV7 217 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 TRIM39Q9HCM9 518 aa4.32□□□□□ -1.72
SUB1-202ENST00000502453 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.32□□□□□ -1.72
SUB1-202ENST00000502453 A0A1W2PQU0 124 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 TRPA1O75762 1119 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 COPAP53621 1224 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 IFIT5Q13325 482 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 PSMD6Q15008 389 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CPLX2Q6PUV4 134 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 GPR155Q7Z3F1 870 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CMIPQ8IY22 773 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 AFAP1L1Q8TED9 768 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 LRCH3Q96II8 777 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 MRPL4Q9BYD3 311 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 CEP44Q9C0F1 390 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CBX8Q9HC52 389 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 TOPORSQ9NS56 1045 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 NFKBIL1Q9UBC1 381 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 DNTTP04053 509 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CASQ1P31415 396 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 NPTX2P47972 431 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 PRIM2P49643 509 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 TNFAIP2Q03169 654 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 MTFR1Q15390 333 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 DDB1Q16531 1140 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 SLC10A5Q5PT55 438 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 INTS11Q5TA45 600 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 SHQ1Q6PI26 577 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 CCDC129Q6ZRS4 1044 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 PTRH1Q86Y79 214 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 PPP1R35Q8TAP8 253 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ZNF516Q92618 1163 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 TAF4BQ92750 862 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 KLRG1Q96E93 195 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 DESI2Q9BSY9 194 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CCDC94Q9BW85 323 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 HOXC10Q9NYD6 342 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ITGB1BP2Q9UKP3 347 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ROBO2Q9HCK4 1378 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 LTBP3Q9NS15 1303 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ANKRD18BA2A2Z9 1011 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 FAM221AA4D161 298 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 SOD2P04179 222 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CYP2E1P05181 493 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 AKR1B1P15121 316 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ENPP1P22413 925 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ANP32AP39687 249 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 ADCYAP1R1P41586 468 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 CDCA2Q69YH5 1023 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 CYB5RLQ6IPT4 315 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 UBE2R2Q712K3 238 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 ZNF280CQ8ND82 737 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 FERMT2Q96AC1 680 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 ZSCAN31Q96LW9 406 aaPredicted RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 AGAP3Q96P47 875 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 AARSD1Q9BTE6 412 aaKnown RBP4.31□□□□□ -1.72
SUB1-202ENST00000502453 LIN7BQ9HAP6 207 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 GGA3Q9NZ52 723 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 GIMAP2Q9UG22 337 aa4.31□□□□□ -1.72
SUB1-202ENST00000502453 SOWAHBA6NEL2 793 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 RTCAO00442 366 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 ZEB2O60315 1214 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 H2AFYO75367 372 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 FKBP9O95302 570 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 TBX18O95935 607 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 APBA3O96018 575 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 PPM1AP35813 382 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 TXLNAP40222 546 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 YARSP54577 528 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 TMF1P82094 1093 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 MLLT1Q03111 559 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 ISM2Q6H9L7 571 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 C16orf87Q6PH81 154 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 FKBP9P1Q75LS8 142 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 PDZD4Q76G19 769 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 SCUBE1Q8IWY4 988 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 REXO1Q8N1G1 1221 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 NKAIN3Q8N8D7 197 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 B4DLN1 442 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 BOLA2-SMG1P6H3BVE0 249 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms