RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ASB14A6NK59 587 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 M0R2C6 588 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 SLC1A4P43007 532 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 CUL9Q8IWT3 2517 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 ZEB2O60315 1214 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 PLA2G6O60733 806 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 TIMP1P01033 207 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 GJA9P57773 515 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 PPARAQ07869 468 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-211ENST00000502404 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 CABYRO75952 493 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■□□□□ 10.1
UBE2D3-211ENST00000502404 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 TMEM199Q8N511 208 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 AP5M1Q9H0R1 490 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
UBE2D3-211ENST00000502404 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 ARVCFO00192 962 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 ASGR1P07306 291 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 MX1P20591 662 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 MCCP23508 829 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
UBE2D3-211ENST00000502404 ALAS1P13196 640 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 FOSL2P15408 326 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 ITGB8P26012 769 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 CDK7P50613 346 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 IQSEC1Q6DN90 963 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 MTIF3Q9H2K0 278 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-211ENST00000502404 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 EPHB4P54760 987 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 NKX3-2P78367 333 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 Q9Y3F1 56 aa13.14□□□□□ -0.31
UBE2D3-211ENST00000502404 MYADML2A6NDP7 307 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 ALX1Q15699 326 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 FGD4Q96M96 766 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 HELLSQ9NRZ9 838 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms