RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 M0R2N6 131 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 ATP1A1P05023 1023 aaKnown RBP18.33■□□□□ 0.53
COL6A1-206ENST00000498614 RASA1P20936 1047 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 GNAQP50148 359 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 ANKRD20A12PQ8NF67 263 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 ZNF622Q969S3 477 aaKnown RBP eCLIP18.33■□□□□ 0.53
COL6A1-206ENST00000498614 MMS19Q96T76 1030 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 ACBD3Q9H3P7 528 aa18.33■□□□□ 0.53
COL6A1-206ENST00000498614 PSMD14O00487 310 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 SRGAP2O75044 1071 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 RNF40O75150 1001 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 SYF2O95926 243 aaKnown RBP18.33■□□□□ 0.52
COL6A1-206ENST00000498614 SRGNP10124 158 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 GPSM2P81274 684 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 PLIN2Q99541 437 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-206ENST00000498614 DISC1Q9NRI5 854 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 ANKRD31Q8N7Z5 1873 aa18.33■□□□□ 0.52
COL6A1-206ENST00000498614 STXBP3O00186 592 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 BTDP43251 543 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 PPP4CP60510 307 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 HERVK_113P62684 666 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 ZNF658Q5TYW1 1059 aaPredicted RBP18.32■□□□□ 0.52
COL6A1-206ENST00000498614 DTHD1Q6ZMT9 781 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 PRCPP42785 496 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 AARSP49588 968 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL6A1-206ENST00000498614 RBM17Q96I25 401 aaKnown RBP18.32■□□□□ 0.52
COL6A1-206ENST00000498614 PLEKHA4Q9H4M7 779 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
COL6A1-206ENST00000498614 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
COL6A1-206ENST00000498614 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
COL6A1-206ENST00000498614 TRIM49BA6NDI0 452 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 LDHCP07864 332 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 OR8K1Q8NGG5 319 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 VIPAS39Q9H9C1 493 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 TCP11L1Q9NUJ3 509 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 HPCAL4Q9UM19 191 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
COL6A1-206ENST00000498614 UFL1O94874 794 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
COL6A1-206ENST00000498614 NAALADL2Q58DX5 795 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 MB21D1Q8N884 522 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 CAPZA3Q96KX2 299 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 HAUS4Q9H6D7 363 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
COL6A1-206ENST00000498614 PPP1R1BQ9UD71 204 aaPredicted RBP18.31■□□□□ 0.52
COL6A1-206ENST00000498614 CDK5RAP2Q96SN8 1893 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
COL6A1-206ENST00000498614 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 ZMYND10O75800 440 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 PRPF6O94906 941 aaKnown RBP18.3■□□□□ 0.52
COL6A1-206ENST00000498614 PDE6BP35913 854 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 WDR59Q6PJI9 974 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 GDAP1L1Q96MZ0 367 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 CD209Q9NNX6 404 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 SAR1BQ9Y6B6 198 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 SNED1Q8TER0 1413 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 CDK8P49336 464 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 AFAP1L1Q8TED9 768 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 RIN2Q8WYP3 895 aaPredicted RBP18.3■□□□□ 0.52
COL6A1-206ENST00000498614 EYA3Q99504 573 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 DNAJC7Q99615 494 aa18.3■□□□□ 0.52
COL6A1-206ENST00000498614 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
COL6A1-206ENST00000498614 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
COL6A1-206ENST00000498614 EIF3CLB5ME19 914 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 UBA7P41226 1012 aa18.29■□□□□ 0.52
COL6A1-206ENST00000498614 NOP2P46087 812 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 PMS1P54277 932 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 PAPD7Q5XG87 772 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 GSPT2Q8IYD1 628 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 IPO4Q8TEX9 1081 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 EIF3CQ99613 913 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 LUC7L2Q9Y383 392 aaKnown RBP18.29■□□□□ 0.52
COL6A1-206ENST00000498614 LGALS16A8MUM7 142 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
COL6A1-206ENST00000498614 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
COL6A1-206ENST00000498614 NT5C2P49902 561 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 NAPAP54920 295 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
COL6A1-206ENST00000498614 H7C1D1 291 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 LRRC15Q8TF66 581 aa18.28■□□□□ 0.52
COL6A1-206ENST00000498614 RCCD1A6NED2 376 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 H0YIN7 160 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 MAGEA9P43362 315 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 GALNT17Q6IS24 598 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 C16orf86Q6ZW13 317 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 ADSSL1Q8N142 457 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 ZNF507Q8TCN5 953 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 COG1Q8WTW3 980 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms