RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 GRIN2CQ14957 1233 aa29.81■■■□□ 2.36
MKRN1-216ENST00000498535 DUSP28Q4G0W2 176 aa29.81■■■□□ 2.36
MKRN1-216ENST00000498535 RNF41Q9H4P4 317 aaPredicted RBP29.81■■■□□ 2.36
MKRN1-216ENST00000498535 IL23AQ9NPF7 189 aa29.81■■■□□ 2.36
MKRN1-216ENST00000498535 AAMPQ13685 434 aa29.8■■■□□ 2.36
MKRN1-216ENST00000498535 MPHOSPH6Q99547 160 aaKnown RBP29.8■■■□□ 2.36
MKRN1-216ENST00000498535 WDR11Q9BZH6 1224 aa29.8■■■□□ 2.36
MKRN1-216ENST00000498535 MTIF3Q9H2K0 278 aaKnown RBP29.8■■■□□ 2.36
MKRN1-216ENST00000498535 CALML3P27482 149 aa29.79■■■□□ 2.36
MKRN1-216ENST00000498535 TMEM63BQ5T3F8 832 aa29.79■■■□□ 2.36
MKRN1-216ENST00000498535 RASIP1Q5U651 963 aa29.79■■■□□ 2.36
MKRN1-216ENST00000498535 RNF207Q6ZRF8 634 aa29.79■■■□□ 2.36
MKRN1-216ENST00000498535 GRIN2DO15399 1336 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 FGBP02675 491 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 PSMC6P62333 389 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 ZNF543Q08ER8 600 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 ESR2Q92731 530 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 TRPV6Q9H1D0 765 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 RWDD1Q9H446 243 aaPredicted RBP29.78■■■□□ 2.36
MKRN1-216ENST00000498535 POLR3EQ9NVU0 708 aa29.78■■■□□ 2.36
MKRN1-216ENST00000498535 LCTP09848 1927 aa29.77■■■□□ 2.36
MKRN1-216ENST00000498535 GRXCR1A8MXD5 290 aa29.77■■■□□ 2.36
MKRN1-216ENST00000498535 B4GALNT3Q6L9W6 998 aa29.77■■■□□ 2.36
MKRN1-216ENST00000498535 PBX4Q9BYU1 374 aa29.77■■■□□ 2.36
MKRN1-216ENST00000498535 B4GALT4O60513 344 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 SDSP20132 328 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 CPT1AP50416 773 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 PDE4DQ08499 809 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 SLC30A10Q6XR72 485 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 TBC1D10CQ8IV04 446 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 CLEC4DQ8WXI8 215 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 HERVK_113Q902F9 699 aa29.76■■■□□ 2.35
MKRN1-216ENST00000498535 GPHNQ9NQX3 736 aaPredicted RBP29.76■■■□□ 2.35
MKRN1-216ENST00000498535 WDR19Q8NEZ3 1342 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 ZNF213O14771 459 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 SNHG28P0DPA3 235 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 PBX2P40425 430 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 CCL23P55773 120 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 BRDTQ58F21 947 aaPredicted RBP29.75■■■□□ 2.35
MKRN1-216ENST00000498535 GPATCH4Q5T3I0 446 aaKnown RBP29.75■■■□□ 2.35
MKRN1-216ENST00000498535 NOC4LQ9BVI4 516 aaKnown RBP29.75■■■□□ 2.35
MKRN1-216ENST00000498535 MSRAQ9UJ68 235 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 VCANP13611 3396 aa29.75■■■□□ 2.35
MKRN1-216ENST00000498535 UMODL1Q5DID0 1318 aa29.74■■■□□ 2.35
MKRN1-216ENST00000498535 B4DLN1 442 aa29.74■■■□□ 2.35
MKRN1-216ENST00000498535 MRPL12P52815 198 aaKnown RBP29.74■■■□□ 2.35
MKRN1-216ENST00000498535 RPS6P62753 249 aaKnown RBP29.74■■■□□ 2.35
MKRN1-216ENST00000498535 RAB30Q15771 203 aa29.74■■■□□ 2.35
MKRN1-216ENST00000498535 SMC5Q8IY18 1101 aa29.74■■■□□ 2.35
MKRN1-216ENST00000498535 RPUSD2Q8IZ73 545 aaKnown RBP29.74■■■□□ 2.35
MKRN1-216ENST00000498535 GAS2L1Q99501 681 aaPredicted RBP29.74■■■□□ 2.35
MKRN1-216ENST00000498535 ALDH8A1Q9H2A2 487 aaPredicted RBP29.74■■■□□ 2.35
MKRN1-216ENST00000498535 RBM47A0AV96 593 aaKnown RBP29.73■■■□□ 2.35
MKRN1-216ENST00000498535 MYL3P08590 195 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 SUPT20HL2P0C7V6 817 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 NT5C2P49902 561 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 CCDC178Q5BJE1 867 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 DGKHQ86XP1 1220 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 DNERQ8NFT8 737 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 OR6J1Q8NGC5 347 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 ZKSCAN3Q9BRR0 538 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 MYO9BQ13459 2157 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 CHD9Q3L8U1 2897 aa29.73■■■□□ 2.35
MKRN1-216ENST00000498535 RAD50Q92878 1312 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 NKRFO15226 690 aaKnown RBP eCLIP29.72■■■□□ 2.35
MKRN1-216ENST00000498535 PPP2R5BQ15173 497 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 OTOP2Q7RTS6 562 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 CHD1LQ86WJ1 897 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 IQCA1Q86XH1 822 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 DIAPH3Q9NSV4 1193 aa29.72■■■□□ 2.35
MKRN1-216ENST00000498535 NEDD4P46934 1319 aa29.71■■■□□ 2.35
MKRN1-216ENST00000498535 GOLGA8HP0CJ92 632 aa29.71■■■□□ 2.35
MKRN1-216ENST00000498535 PURAQ00577 322 aaKnown RBP29.71■■■□□ 2.35
MKRN1-216ENST00000498535 USH1GQ495M9 461 aa29.71■■■□□ 2.35
MKRN1-216ENST00000498535 SCFD2Q8WU76 684 aa29.71■■■□□ 2.35
MKRN1-216ENST00000498535 MTG1Q9BT17 334 aaPredicted RBP29.71■■■□□ 2.35
MKRN1-216ENST00000498535 CXXC1Q9P0U4 656 aaPredicted RBP29.71■■■□□ 2.35
MKRN1-216ENST00000498535 CWC27Q6UX04 472 aaKnown RBP29.7■■■□□ 2.35
MKRN1-216ENST00000498535 PLEKHM2Q8IWE5 1019 aa29.7■■■□□ 2.35
MKRN1-216ENST00000498535 WNT8AQ9H1J5 351 aa29.7■■■□□ 2.35
MKRN1-216ENST00000498535 EDNRBP24530 442 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 PNMA1Q8ND90 353 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 RGS22Q8NE09 1264 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 UBA5Q9GZZ9 404 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 OSBPL3Q9H4L5 887 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 PRDM12Q9H4Q4 367 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 KAT14Q9H8E8 782 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 TRMT13Q9NUP7 481 aaKnown RBP29.69■■■□□ 2.34
MKRN1-216ENST00000498535 TTC28Q96AY4 2481 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 TNKSO95271 1327 aa29.69■■■□□ 2.34
MKRN1-216ENST00000498535 HIP1O00291 1037 aa29.68■■■□□ 2.34
MKRN1-216ENST00000498535 KPNA6O60684 536 aa29.68■■■□□ 2.34
MKRN1-216ENST00000498535 KDM4AO75164 1064 aa29.68■■■□□ 2.34
MKRN1-216ENST00000498535 SYMPKQ92797 1274 aaKnown RBP29.68■■■□□ 2.34
MKRN1-216ENST00000498535 SLC28A3Q9HAS3 691 aa29.68■■■□□ 2.34
MKRN1-216ENST00000498535 TXNP10599 105 aaKnown RBP29.67■■■□□ 2.34
MKRN1-216ENST00000498535 NUCB1Q02818 461 aa29.67■■■□□ 2.34
MKRN1-216ENST00000498535 FAM47CQ5HY64 1035 aa29.67■■■□□ 2.34
MKRN1-216ENST00000498535 SCLYQ96I15 445 aa29.67■■■□□ 2.34
MKRN1-216ENST00000498535 SLC4A7Q9Y6M7 1214 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms