RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 USP51Q70EK9 711 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 FAM124AQ86V42 546 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 REXO1Q8N1G1 1221 aaKnown RBP4.32□□□□□ -1.72
SGMS1-205ENST00000498514 Q8N1X5 172 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 PEX11GQ96HA9 241 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 FCRL3Q96P31 734 aaPredicted RBP4.32□□□□□ -1.72
SGMS1-205ENST00000498514 SUCOQ9UBS9 1254 aaKnown RBP4.32□□□□□ -1.72
SGMS1-205ENST00000498514 NUDT5Q9UKK9 219 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 INVSQ9Y283 1065 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 TSC22D4Q9Y3Q8 395 aa4.32□□□□□ -1.72
SGMS1-205ENST00000498514 MEIS3P2A8K0S8 358 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 FZD7O75084 574 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 ZNF165P49910 485 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 SMAD4Q13485 552 aaKnown RBP4.31□□□□□ -1.72
SGMS1-205ENST00000498514 SEZ6Q53EL9 994 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 CRIP3Q6Q6R5 217 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 ERMP1Q7Z2K6 904 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 LINC00482Q8N8I6 264 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 ZNF296Q8WUU4 475 aaPredicted RBP4.31□□□□□ -1.72
SGMS1-205ENST00000498514 SSBP3Q9BWW4 388 aaPredicted RBP4.31□□□□□ -1.72
SGMS1-205ENST00000498514 MRS2Q9HD23 443 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 COPRSQ9NQ92 184 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 VTI1BQ9UEU0 232 aa4.31□□□□□ -1.72
SGMS1-205ENST00000498514 C9IYK1 514 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 ZBTB7AO95365 584 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 MCM4P33991 863 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 ZNF445P59923 1031 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 INTS3Q68E01 1043 aaKnown RBP4.3□□□□□ -1.72
SGMS1-205ENST00000498514 LIMS2Q7Z4I7 341 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 SMARCC1Q92922 1105 aaPredicted RBP4.3□□□□□ -1.72
SGMS1-205ENST00000498514 BRF1Q92994 677 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 DDX11Q96FC9 970 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 UBP1Q9NZI7 540 aa4.3□□□□□ -1.72
SGMS1-205ENST00000498514 SF3B6Q9Y3B4 125 aaKnown RBP4.3□□□□□ -1.72
SGMS1-205ENST00000498514 FAM86C2PA6NEL3 165 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 MROH6A6NGR9 719 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 CD3EP07766 207 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 CYP2C8P10632 490 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 IFNGR1P15260 489 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
SGMS1-205ENST00000498514 PMS1P54277 932 aaKnown RBP4.29□□□□□ -1.72
SGMS1-205ENST00000498514 POU4F1Q01851 419 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 CRB2Q5IJ48 1285 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 FAM26FQ5R3K3 315 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 FIBCD1Q8N539 461 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 NETO2Q8NC67 525 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 CDK5RAP1Q96SZ6 601 aaKnown RBP4.29□□□□□ -1.72
SGMS1-205ENST00000498514 VPS11Q9H270 941 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 PCDH18Q9HCL0 1135 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 GP6Q9HCN6 339 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 FHOD1Q9Y613 1164 aa4.29□□□□□ -1.72
SGMS1-205ENST00000498514 CD247P20963 164 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 THBS2P35442 1172 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 ITGAEP38570 1179 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 APOBRQ0VD83 1088 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 CDSNQ15517 529 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 TDRD10Q5VZ19 366 aaKnown RBP4.28□□□□□ -1.72
SGMS1-205ENST00000498514 DCAF15Q66K64 600 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 C11orf84Q9BUA3 381 aaPredicted RBP4.28□□□□□ -1.72
SGMS1-205ENST00000498514 ZNF747Q9BV97 191 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 KLC2Q9H0B6 622 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 RWDD3Q9Y3V2 267 aa4.28□□□□□ -1.72
SGMS1-205ENST00000498514 ACRP10323 421 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 SURF1Q15526 300 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 AXDND1Q5T1B0 1012 aaPredicted RBP4.27□□□□□ -1.73
SGMS1-205ENST00000498514 EEF1DP3Q658K8 133 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 MCTP2Q6DN12 878 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 RCSD1Q6JBY9 416 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 TXNDC5Q8NBS9 432 aaKnown RBP4.27□□□□□ -1.73
SGMS1-205ENST00000498514 USP33Q8TEY7 942 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 NKD1Q969G9 470 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 ZDHHC15Q96MV8 337 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 NOL6Q9H6R4 1146 aaKnown RBP4.27□□□□□ -1.73
SGMS1-205ENST00000498514 FBLN5Q9UBX5 448 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 ADAMTS1Q9UHI8 967 aa4.27□□□□□ -1.73
SGMS1-205ENST00000498514 PATL2C9JE40 543 aaKnown RBP4.26□□□□□ -1.73
SGMS1-205ENST00000498514 LAMTOR5O43504 91 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 PPP1R11O60927 126 aaPredicted RBP4.26□□□□□ -1.73
SGMS1-205ENST00000498514 AMHP03971 560 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 TP53P04637 393 aaPredicted RBP4.26□□□□□ -1.73
SGMS1-205ENST00000498514 C8BP07358 591 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 WWC2Q6AWC2 1192 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 SLITRK4Q8IW52 837 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 TTLL6Q8N841 843 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 KYQ8NBH2 561 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 PCED1AQ9H1Q7 454 aa4.26□□□□□ -1.73
SGMS1-205ENST00000498514 A0A087WZG4 1122 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 ITGA4P13612 1032 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 ICAM4Q14773 271 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 C9orf131Q5VYM1 1079 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 PPFIBP1Q86W92 1011 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 TAB3Q8N5C8 712 aaPredicted RBP4.25□□□□□ -1.73
SGMS1-205ENST00000498514 LCORQ96JN0 433 aaPredicted RBP4.25□□□□□ -1.73
SGMS1-205ENST00000498514 SYT3Q9BQG1 590 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 MTA3Q9BTC8 594 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 PPP4R1LQ9P1A2 415 aa4.25□□□□□ -1.73
SGMS1-205ENST00000498514 GULP1Q9UBP9 304 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms