RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 NCOR1O75376 2440 aa19.03■□□□□ 0.64
MUC1-220ENST00000498431 TTC41PQ6P2S7 1318 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 CYP2C9P11712 490 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 SLC16A2P36021 539 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 BAATQ14032 418 aaPredicted RBP19.02■□□□□ 0.64
MUC1-220ENST00000498431 TTLL4Q14679 1199 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 LRRFIP1Q32MZ4 808 aaKnown RBP19.02■□□□□ 0.64
MUC1-220ENST00000498431 PPP2R2DQ66LE6 453 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 PPP1R13LQ8WUF5 828 aa19.02■□□□□ 0.64
MUC1-220ENST00000498431 ZBBXA8MT70 800 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 NFIBO00712 420 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 ICAM1P05362 532 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 CCDC96Q2M329 555 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 DUSP28Q4G0W2 176 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 VPS53Q5VIR6 699 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 MICALL1Q8N3F8 863 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 UHRF1Q96T88 793 aaPredicted RBP19.01■□□□□ 0.63
MUC1-220ENST00000498431 SEZ6LQ9BYH1 1024 aa19.01■□□□□ 0.63
MUC1-220ENST00000498431 RANBP17Q9H2T7 1088 aaKnown RBP19.01■□□□□ 0.63
MUC1-220ENST00000498431 TCF20Q9UGU0 1960 aaKnown RBP19.01■□□□□ 0.63
MUC1-220ENST00000498431 RANBP6O60518 1105 aaKnown RBP19■□□□□ 0.63
MUC1-220ENST00000498431 NOVP48745 357 aa19■□□□□ 0.63
MUC1-220ENST00000498431 ALDH5A1P51649 535 aaPredicted RBP19■□□□□ 0.63
MUC1-220ENST00000498431 RPUSD2Q8IZ73 545 aaKnown RBP19■□□□□ 0.63
MUC1-220ENST00000498431 NECAB3Q96P71 396 aaPredicted RBP19■□□□□ 0.63
MUC1-220ENST00000498431 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
MUC1-220ENST00000498431 PCDHA11Q9Y5I1 949 aa19■□□□□ 0.63
MUC1-220ENST00000498431 TNKSO95271 1327 aa19■□□□□ 0.63
MUC1-220ENST00000498431 RFXAPO00287 272 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 ERC2O15083 957 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 ATP2A2P16615 1042 aaKnown RBP18.99■□□□□ 0.63
MUC1-220ENST00000498431 PURAQ00577 322 aaKnown RBP18.99■□□□□ 0.63
MUC1-220ENST00000498431 TFF2Q03403 129 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 SLC30A10Q6XR72 485 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 DEFB128Q7Z7B8 93 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 PCDHB15Q9Y5E8 787 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 SCN10AQ9Y5Y9 1956 aa18.99■□□□□ 0.63
MUC1-220ENST00000498431 MYL3P08590 195 aa18.98■□□□□ 0.63
MUC1-220ENST00000498431 SYDE2Q5VT97 1194 aa18.98■□□□□ 0.63
MUC1-220ENST00000498431 BTNL9Q6UXG8 535 aa18.98■□□□□ 0.63
MUC1-220ENST00000498431 POLR3EQ9NVU0 708 aa18.98■□□□□ 0.63
MUC1-220ENST00000498431 ANAPC4Q9UJX5 808 aa18.98■□□□□ 0.63
MUC1-220ENST00000498431 FRMPD2Q68DX3 1309 aaPredicted RBP18.98■□□□□ 0.63
MUC1-220ENST00000498431 PRRC2BQ5JSZ5 2229 aaKnown RBP18.97■□□□□ 0.63
MUC1-220ENST00000498431 RBM47A0AV96 593 aaKnown RBP18.97■□□□□ 0.63
MUC1-220ENST00000498431 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 CA3P07451 260 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 OR6J1Q8NGC5 347 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 CLEC4DQ8WXI8 215 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 CERS4Q9HA82 394 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 GPCPD1Q9NPB8 672 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 ADD3Q9UEY8 706 aaKnown RBP18.97■□□□□ 0.63
MUC1-220ENST00000498431 SALL3Q9BXA9 1300 aa18.97■□□□□ 0.63
MUC1-220ENST00000498431 EPOPA6NHQ4 379 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 ORC4O43929 436 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 ARHGEF15O94989 841 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 FGRP09769 529 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 SUPT20HL2P0C7V6 817 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 BMP1P13497 986 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 MX1P20591 662 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 CALML3P27482 149 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 CPT1AP50416 773 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 NBPF20Q3BBV1 942 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 COPS5Q92905 334 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 TMEM47Q9BQJ4 181 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 MTG1Q9BT17 334 aaPredicted RBP18.96■□□□□ 0.63
MUC1-220ENST00000498431 TANC1Q9C0D5 1861 aa18.96■□□□□ 0.63
MUC1-220ENST00000498431 KCNQ1P51787 676 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 FAM47CQ5HY64 1035 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 TMEM67Q5HYA8 995 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 KRT40Q6A162 431 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 IL27Q8NEV9 243 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 TET1Q8NFU7 2136 aa18.95■□□□□ 0.62
MUC1-220ENST00000498431 PFKMP08237 780 aa18.94■□□□□ 0.62
MUC1-220ENST00000498431 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
MUC1-220ENST00000498431 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
MUC1-220ENST00000498431 MTCH2Q9Y6C9 303 aa18.94■□□□□ 0.62
MUC1-220ENST00000498431 LOC102724159A0A0B4J2E5 919 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 RBAK-RBAKDNI3L0D1 243 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 PDHBP11177 359 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
MUC1-220ENST00000498431 EDNRBP24530 442 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 RPS6P62753 249 aaKnown RBP18.93■□□□□ 0.62
MUC1-220ENST00000498431 PDE4DQ08499 809 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 PWP2Q15269 919 aaKnown RBP18.93■□□□□ 0.62
MUC1-220ENST00000498431 ALX1Q15699 326 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 RNF207Q6ZRF8 634 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 TSPYL2Q9H2G4 693 aaPredicted RBP18.93■□□□□ 0.62
MUC1-220ENST00000498431 GPHNQ9NQX3 736 aaPredicted RBP18.93■□□□□ 0.62
MUC1-220ENST00000498431 PTPRSQ13332 1948 aa18.93■□□□□ 0.62
MUC1-220ENST00000498431 ARIH2O95376 493 aa18.92■□□□□ 0.62
MUC1-220ENST00000498431 FGAP02671 866 aa18.92■□□□□ 0.62
MUC1-220ENST00000498431 IQCF3P0C7M6 154 aa18.92■□□□□ 0.62
MUC1-220ENST00000498431 TAP1Q03518 808 aa18.92■□□□□ 0.62
MUC1-220ENST00000498431 SKIV2LQ15477 1246 aaKnown RBP18.92■□□□□ 0.62
MUC1-220ENST00000498431 SPRED2Q7Z698 418 aa18.92■□□□□ 0.62
MUC1-220ENST00000498431 FAM227BQ96M60 508 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms