RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PWP2Q15269 919 aaKnown RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 HEATR3Q7Z4Q2 680 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 FAM133AQ8N9E0 248 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 SH3TC2Q8TF17 1288 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 TRIB2Q92519 343 aa18.44■□□□□ 0.54
SSBP1-214ENST00000498107 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
SSBP1-214ENST00000498107 ASB14A6NK59 587 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 INHAP05111 366 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 CALML3P27482 149 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 GHRHRQ02643 423 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 CCL14Q16627 93 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 ME3Q16798 604 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 PFKFB3Q16875 520 aaPredicted RBP18.43■□□□□ 0.54
SSBP1-214ENST00000498107 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 CCDC12Q8WUD4 166 aaPredicted RBP18.43■□□□□ 0.54
SSBP1-214ENST00000498107 CUL5Q93034 780 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 GTF3C6Q969F1 213 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 TINF2Q9BSI4 451 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 GLT8D2Q9H1C3 349 aa18.43■□□□□ 0.54
SSBP1-214ENST00000498107 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
SSBP1-214ENST00000498107 DEXIO95424 95 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 CFBP00751 764 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 POLR2MP0CAP2 368 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 SCG2P13521 617 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 PHKBQ93100 1093 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 ABHD8Q96I13 439 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 ZNF333Q96JL9 665 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 BARHL2Q9NY43 387 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 SYNGAP1Q96PV0 1343 aa18.42■□□□□ 0.54
SSBP1-214ENST00000498107 HSD17B4P51659 736 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 NAPAP54920 295 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 CNTN2Q02246 1040 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-214ENST00000498107 SYTL5Q8TDW5 730 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-214ENST00000498107 PSTPIP2Q9H939 334 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 FLRT1Q9NZU1 646 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 CNPY2Q9Y2B0 182 aa18.41■□□□□ 0.54
SSBP1-214ENST00000498107 PRKAR2AP13861 404 aaKnown RBP18.4■□□□□ 0.54
SSBP1-214ENST00000498107 WWC2Q6AWC2 1192 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 WASF1Q92558 559 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 GPKOWQ92917 476 aaPredicted RBP eCLIP18.4■□□□□ 0.545e-7■■■■■ 43.5
SSBP1-214ENST00000498107 TMEM106CQ9BVX2 250 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
SSBP1-214ENST00000498107 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
SSBP1-214ENST00000498107 SOWAHBA6NEL2 793 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 PIK3CDO00329 1044 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 OPLAHO14841 1288 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 IGHA2P01877 340 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 CYP2C19P33261 490 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 ALDH5A1P51649 535 aaPredicted RBP18.39■□□□□ 0.53
SSBP1-214ENST00000498107 CACNB2Q08289 660 aaPredicted RBP18.39■□□□□ 0.53
SSBP1-214ENST00000498107 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 NSUN6Q8TEA1 469 aaKnown RBP18.39■□□□□ 0.53
SSBP1-214ENST00000498107 TBC1D5Q92609 795 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 SH3GLB2Q9NR46 395 aa18.39■□□□□ 0.53
SSBP1-214ENST00000498107 STXBP3O00186 592 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 LARGE1O95461 756 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 CAPN2P17655 700 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 XBP1P17861 261 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 GNA11P29992 359 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 PKN1Q16512 942 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 FGD4Q96M96 766 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 RMDN3Q96TC7 470 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
SSBP1-214ENST00000498107 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
SSBP1-214ENST00000498107 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
SSBP1-214ENST00000498107 ESYT2A0FGR8 921 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 CCL5P13501 91 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 HOXA13P31271 388 aaPredicted RBP18.37■□□□□ 0.53
SSBP1-214ENST00000498107 ADCY7P51828 1080 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 ARHGEF16Q5VV41 709 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 BICD2Q8TD16 824 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 MORC4Q8TE76 937 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 RIC8AQ9NPQ8 531 aa18.37■□□□□ 0.53
SSBP1-214ENST00000498107 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 MSCO60682 206 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 LCTP09848 1927 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 CYBAP13498 195 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 PDE4DQ08499 809 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 TRIM32Q13049 653 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 TAAR1Q96RJ0 339 aa18.36■□□□□ 0.53
SSBP1-214ENST00000498107 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms