RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
TRAPPC12-223ENST00000497597 PXDNLA1KZ92 1463 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 CAND2O75155 1236 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 SAMD15Q9P1V8 674 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 ATP8A1Q9Y2Q0 1164 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 SMIM24O75264 130 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 DDR1Q08345 913 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 KDM7AQ6ZMT4 941 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 XDHP47989 1333 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 MYH10P35580 1976 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 H7C1D1 291 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 EVI5O60447 810 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 EPS15P42566 896 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 SKOR1P84550 965 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 HLFQ16534 295 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 SOGA3Q5TF21 947 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 TSGA10Q9BZW7 698 aa11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
TRAPPC12-223ENST00000497597 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 RASSF9O75901 435 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 SLC1A4P43007 532 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 TNNC1P63316 161 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 FANCBQ8NB91 859 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-223ENST00000497597 HMGB1P1B2RPK0 211 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 PALMO75781 387 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 IFNAR1P17181 557 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 SESN3P58005 492 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 MMGT1Q8N4V1 131 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 SLC39A2Q9NP94 309 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.54
TRAPPC12-223ENST00000497597 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 H0Y3Z8 333 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 RAD51CO43502 376 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CABP4P57796 275 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 ZBED6P86452 979 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 NTRK3Q16288 839 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 DYMQ7RTS9 669 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CCDC155Q8N6L0 562 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CUL5Q93034 780 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CAPN11Q9UMQ6 739 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 SETD1AO15047 1707 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 INHBEP58166 350 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 LRRC14Q15048 493 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 TAF11Q15544 211 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CCDC38Q502W7 563 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 CRACR2BQ8N4Y2 399 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 PAIP2Q9BPZ3 127 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 C21orf2O43822 256 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 MXRA7P84157 204 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 PDIA6Q15084 440 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 IP6K1Q92551 441 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 KLHL29Q96CT2 875 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 SEPT11Q9NVA2 429 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 PNMA2Q9UL42 364 aa11.7□□□□□ -0.54
TRAPPC12-223ENST00000497597 FOXP2O15409 715 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 POLE2P56282 527 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 SH3GL3Q99963 347 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 PIH1D3Q9NQM4 214 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 ZNF263O14978 683 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 PDE6AP16499 860 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 KIF5BP33176 963 aa11.69□□□□□ -0.54
TRAPPC12-223ENST00000497597 PPP2R2AP63151 447 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms