RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 CACNB2Q08289 660 aaPredicted RBP18.73■□□□□ 0.59
FAM3A-220ENST00000497506 SCRN1Q12765 414 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 MTFR1Q15390 333 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 MFSD14CQ5VZR4 134 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 PHKBQ93100 1093 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
FAM3A-220ENST00000497506 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 PRKAR2AP13861 404 aaKnown RBP18.72■□□□□ 0.59
FAM3A-220ENST00000497506 CALML3P27482 149 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 HSD17B4P51659 736 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 PKN1Q16512 942 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 WWC2Q6AWC2 1192 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 MSL3Q8N5Y2 521 aaKnown RBP18.72■□□□□ 0.59
FAM3A-220ENST00000497506 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
FAM3A-220ENST00000497506 UNC93B1Q9H1C4 597 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 CENPFP49454 3210 aa18.72■□□□□ 0.59
FAM3A-220ENST00000497506 CFBP00751 764 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 MYCP01106 439 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-220ENST00000497506 CCL5P13501 91 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-220ENST00000497506 HEATR3Q7Z4Q2 680 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 SAMD3Q8N6K7 520 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 NECAB1Q8N987 351 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 SYTL5Q8TDW5 730 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-220ENST00000497506 RNF26Q9BY78 433 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-220ENST00000497506 COL20A1Q9P218 1284 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 RPTORQ8N122 1335 aa18.71■□□□□ 0.59
FAM3A-220ENST00000497506 CPLX1O14810 134 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 SNAI1O95863 264 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-220ENST00000497506 TYW1BQ6NUM6 668 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 TRPV1Q8NER1 839 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 TAAR1Q96RJ0 339 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 SLC26A6Q9BXS9 759 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 MAP3K20Q9NYL2 800 aaKnown RBP18.7■□□□□ 0.58
FAM3A-220ENST00000497506 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
FAM3A-220ENST00000497506 SYNGAP1Q96PV0 1343 aa18.7■□□□□ 0.58
FAM3A-220ENST00000497506 CCDC85CA6NKD9 419 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 STXBP3O00186 592 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 CTDNEP1O95476 244 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 CYBAP13498 195 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 SCG2P13521 617 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 HOXA13P31271 388 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 PRAMEF19Q5SWL8 479 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 HMX1Q9NP08 348 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 BARHL2Q9NY43 387 aa18.69■□□□□ 0.58
FAM3A-220ENST00000497506 ADD3Q9UEY8 706 aaKnown RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 KIAA0100Q14667 2235 aaKnown RBP18.69■□□□□ 0.58
FAM3A-220ENST00000497506 LOC102724159A0A0B4J2E5 919 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 ASB14A6NK59 587 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 GCOM1H8Y6P7 765 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 POLR2MP0CAP2 368 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 SSRP1Q08945 709 aaKnown RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 ST3GAL1Q11201 340 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 PWP2Q15269 919 aaKnown RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 CPLX2Q6PUV4 134 aaKnown RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 RNF208Q9H0X6 261 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 PAK6Q9NQU5 681 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-220ENST00000497506 NRBP1Q9UHY1 535 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 LRRC37A2A6NM11 1700 aa18.68■□□□□ 0.58
FAM3A-220ENST00000497506 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 MEIS2O14770 477 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 ST18O60284 1047 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 DTNBO60941 627 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 CD2BP2O95400 341 aaKnown RBP18.67■□□□□ 0.58
FAM3A-220ENST00000497506 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-220ENST00000497506 NAPAP54920 295 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 AKAP17AQ02040 695 aaKnown RBP18.67■□□□□ 0.58
FAM3A-220ENST00000497506 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 TRIM22Q8IYM9 498 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 ZSCAN31Q96LW9 406 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-220ENST00000497506 KATNBL1Q9H079 304 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
FAM3A-220ENST00000497506 CDKL5O76039 1030 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 GJB1P08034 283 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 EDNRBP24530 442 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 USP17L6PQ6QN14 398 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 SHISA4Q96DD7 197 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 RMDN3Q96TC7 470 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 TMEM106CQ9BVX2 250 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 CNPY2Q9Y2B0 182 aa18.66■□□□□ 0.58
FAM3A-220ENST00000497506 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
FAM3A-220ENST00000497506 DEXIO95424 95 aa18.65■□□□□ 0.58
FAM3A-220ENST00000497506 ACVR2BQ13705 512 aa18.65■□□□□ 0.58
FAM3A-220ENST00000497506 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
FAM3A-220ENST00000497506 NSUN7Q8NE18 718 aaKnown RBP18.65■□□□□ 0.58
FAM3A-220ENST00000497506 NSUN6Q8TEA1 469 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms