RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 CPS1P31327 1500 aa7.25□□□□□ -1.25
GGPS1-208ENST00000497327 NPC1L1Q9UHC9 1359 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 ATE1O95260 518 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 CRKP46108 304 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 LINC00310P59036 64 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 CHRNEQ04844 493 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 NMIQ13287 307 aaPredicted RBP7.24□□□□□ -1.25
GGPS1-208ENST00000497327 SAFB2Q14151 953 aaKnown RBP eCLIP7.24□□□□□ -1.25
GGPS1-208ENST00000497327 USHBP1Q8N6Y0 703 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 ENOX1Q8TC92 643 aaKnown RBP7.24□□□□□ -1.25
GGPS1-208ENST00000497327 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
GGPS1-208ENST00000497327 KCNN1Q92952 543 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 CDK19Q9BWU1 502 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 PCDHB14Q9Y5E9 798 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 QRICH2Q9H0J4 1663 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 NPHP4O75161 1426 aaPredicted RBP7.24□□□□□ -1.25
GGPS1-208ENST00000497327 PTCH1Q13635 1447 aa7.24□□□□□ -1.25
GGPS1-208ENST00000497327 KTN1Q86UP2 1357 aaKnown RBP7.23□□□□□ -1.25
GGPS1-208ENST00000497327 PSPNO60542 156 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 ERCC3P19447 782 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 GBP1P32455 592 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 DUSP4Q13115 394 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 CLEC16AQ2KHT3 1053 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 CWF19L2Q2TBE0 894 aaKnown RBP7.23□□□□□ -1.25
GGPS1-208ENST00000497327 SPPL2CQ8IUH8 684 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 ZNF552Q9H707 407 aaPredicted RBP7.23□□□□□ -1.25
GGPS1-208ENST00000497327 GMIPQ9P107 970 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 KNDC1Q76NI1 1749 aa7.23□□□□□ -1.25
GGPS1-208ENST00000497327 PARD3Q8TEW0 1356 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 NINLQ9Y2I6 1382 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 PEX10O60683 326 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 KCNA6P17658 529 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 POLR2BP30876 1174 aaKnown RBP7.22□□□□□ -1.25
GGPS1-208ENST00000497327 EIF4A3P38919 411 aaKnown RBP7.22□□□□□ -1.25
GGPS1-208ENST00000497327 GALK1P51570 392 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 SNW1Q13573 536 aaKnown RBP7.22□□□□□ -1.25
GGPS1-208ENST00000497327 SNX17Q15036 470 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 RALBP1Q15311 655 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 NBPF9Q3BBW0 867 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 CCDC184Q52MB2 194 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 NBPF12Q5TAG4 269 aaPredicted RBP7.22□□□□□ -1.25
GGPS1-208ENST00000497327 OVOS1Q6IE37 1185 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 RNF111Q6ZNA4 994 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 TTLL10Q6ZVT0 673 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 TMC3Q7Z5M5 1100 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 DAGLBQ8NCG7 672 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 TCTN2Q96GX1 697 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 EHMT1Q9H9B1 1298 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 GCM1Q9NP62 436 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
GGPS1-208ENST00000497327 LMTK3Q96Q04 1460 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 MYOM1P52179 1685 aa7.22□□□□□ -1.25
GGPS1-208ENST00000497327 ANKRD36BQ8N2N9 1353 aa7.21□□□□□ -1.25
GGPS1-208ENST00000497327 XRN1Q8IZH2 1706 aaKnown RBP7.21□□□□□ -1.25
GGPS1-208ENST00000497327 TMEM82A0PJX8 343 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 RNF4P78317 190 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 DLG4P78352 724 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 CDCP2Q5VXM1 449 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 NLRX1Q86UT6 975 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
GGPS1-208ENST00000497327 FOXP3Q9BZS1 431 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 CD163L1Q9NR16 1453 aa7.21□□□□□ -1.26
GGPS1-208ENST00000497327 SEMA7AO75326 666 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 USP2O75604 605 aaPredicted RBP7.2□□□□□ -1.26
GGPS1-208ENST00000497327 RAG1P15918 1043 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 HSPA2P54652 639 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
GGPS1-208ENST00000497327 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 ZNF296Q8WUU4 475 aaPredicted RBP7.2□□□□□ -1.26
GGPS1-208ENST00000497327 KRTAP4-2Q9BYR5 136 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 CNNM2Q9H8M5 875 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 ADAMTS1Q9UHI8 967 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 RAPGEFL1Q9UHV5 662 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 ADGRB2O60241 1585 aa7.2□□□□□ -1.26
GGPS1-208ENST00000497327 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.19□□□□□ -1.26
GGPS1-208ENST00000497327 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
GGPS1-208ENST00000497327 NUAK1O60285 661 aa7.19□□□□□ -1.26
GGPS1-208ENST00000497327 ZNF655Q8N720 491 aaPredicted RBP7.19□□□□□ -1.26
GGPS1-208ENST00000497327 ATG4CQ96DT6 458 aa7.19□□□□□ -1.26
GGPS1-208ENST00000497327 MAP6Q96JE9 813 aa7.19□□□□□ -1.26
GGPS1-208ENST00000497327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.19□□□□□ -1.26
GGPS1-208ENST00000497327 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
GGPS1-208ENST00000497327 MYBBP1AQ9BQG0 1328 aaKnown RBP7.19□□□□□ -1.26
GGPS1-208ENST00000497327 A0A1W2PP64 1363 aa7.19□□□□□ -1.26
GGPS1-208ENST00000497327 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
GGPS1-208ENST00000497327 NRDCO43847 1150 aa7.18□□□□□ -1.26
GGPS1-208ENST00000497327 RPL10P27635 214 aaKnown RBP7.18□□□□□ -1.26
GGPS1-208ENST00000497327 PDE6BP35913 854 aa7.18□□□□□ -1.26
GGPS1-208ENST00000497327 CLCQ05315 142 aa7.18□□□□□ -1.26
GGPS1-208ENST00000497327 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
GGPS1-208ENST00000497327 LILRA6Q6PI73 481 aa7.18□□□□□ -1.26
GGPS1-208ENST00000497327 LINC00116Q8NCU8 138 aa7.18□□□□□ -1.26
GGPS1-208ENST00000497327 HHIPL1Q96JK4 782 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms