RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 SLC43A3Q8NBI5 491 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 CLEC4DQ8WXI8 215 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 DSCC1Q9BVC3 393 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 DLL1O00548 723 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 CD4P01730 458 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 GOLGA8HP0CJ92 632 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 ITGA7Q13683 1181 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 IMMTQ16891 758 aaKnown RBP20.1■□□□□ 0.81
SMC4-226ENST00000497311 DUSP28Q4G0W2 176 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 TMEM63BQ5T3F8 832 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 SLC30A10Q6XR72 485 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 TMEM199Q8N511 208 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 MPHOSPH6Q99547 160 aaKnown RBP20.1■□□□□ 0.81
SMC4-226ENST00000497311 CDX2Q99626 313 aaPredicted RBP20.1■□□□□ 0.81
SMC4-226ENST00000497311 SEZ6LQ9BYH1 1024 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 CTNNA3Q9UI47 895 aa20.1■□□□□ 0.81
SMC4-226ENST00000497311 B4E1Z4 1266 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 RPS6P62753 249 aaKnown RBP20.09■□□□□ 0.81
SMC4-226ENST00000497311 PNMA1Q8ND90 353 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 ZSCAN10Q96SZ4 725 aaPredicted RBP20.09■□□□□ 0.81
SMC4-226ENST00000497311 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.09■□□□□ 0.818e-18■□□□□ 10.5
SMC4-226ENST00000497311 WDR11Q9BZH6 1224 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 UBA5Q9GZZ9 404 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 KAT14Q9H8E8 782 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 A0A0C4DFX4 3053 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
SMC4-226ENST00000497311 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.08■□□□□ 0.81
SMC4-226ENST00000497311 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.08■□□□□ 0.81
SMC4-226ENST00000497311 CSF2RAP15509 400 aa20.08■□□□□ 0.81
SMC4-226ENST00000497311 PDE4DQ08499 809 aa20.08■□□□□ 0.81
SMC4-226ENST00000497311 USH1GQ495M9 461 aa20.08■□□□□ 0.81
SMC4-226ENST00000497311 DNERQ8NFT8 737 aa20.08■□□□□ 0.81
SMC4-226ENST00000497311 ANKS1AQ92625 1134 aa20.08■□□□□ 0.81
SMC4-226ENST00000497311 TTYH1Q9H313 450 aaPredicted RBP20.08■□□□□ 0.81
SMC4-226ENST00000497311 GRIN2DO15399 1336 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 TMEM265A0A087WTH1 108 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 RBM47A0AV96 593 aaKnown RBP20.07■□□□□ 0.8
SMC4-226ENST00000497311 B4DLN1 442 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 MRPL12P52815 198 aaKnown RBP20.07■□□□□ 0.8
SMC4-226ENST00000497311 TMEM240Q5SV17 173 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 KRT23Q9C075 422 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 CPVLQ9H3G5 476 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 ZSWIM5Q9P217 1185 aa20.07■□□□□ 0.8
SMC4-226ENST00000497311 CYP2C18P33260 490 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 PSMC6P62333 389 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 CDC37Q16543 378 aaPredicted RBP20.06■□□□□ 0.8
SMC4-226ENST00000497311 ASPRV1Q53RT3 343 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 PSRC1Q6PGN9 363 aaPredicted RBP20.06■□□□□ 0.8
SMC4-226ENST00000497311 C16orf59Q7L2K0 433 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 ENAHQ8N8S7 591 aaPredicted RBP20.06■□□□□ 0.8
SMC4-226ENST00000497311 RGS22Q8NE09 1264 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 HIPK3Q9H422 1215 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 CNNM2Q9H8M5 875 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 POLR3EQ9NVU0 708 aa20.06■□□□□ 0.8
SMC4-226ENST00000497311 SUPT16HQ9Y5B9 1047 aaKnown RBP20.06■□□□□ 0.8
SMC4-226ENST00000497311 TNKSO95271 1327 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 NKRFO15226 690 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMC4-226ENST00000497311 ACRP10323 421 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 EDNRBP24530 442 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 CPT1AP50416 773 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 ADGRF4Q8IZF3 695 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 OR6J1Q8NGC5 347 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 UBAC1Q9BSL1 405 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 MAF1Q9H063 256 aa20.05■□□□□ 0.8
SMC4-226ENST00000497311 B4GALT4O60513 344 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 PARP1P09874 1014 aaKnown RBP20.04■□□□□ 0.8
SMC4-226ENST00000497311 DNAJB2P25686 324 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 BRDTQ58F21 947 aaPredicted RBP20.04■□□□□ 0.8
SMC4-226ENST00000497311 ZNF365Q70YC5 407 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 SCFD2Q8WU76 684 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 MYLIPQ8WY64 445 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 TRPV6Q9H1D0 765 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 IL23AQ9NPF7 189 aa20.04■□□□□ 0.8
SMC4-226ENST00000497311 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
SMC4-226ENST00000497311 ABCB11O95342 1321 aa20.03■□□□□ 0.8
SMC4-226ENST00000497311 DHX16O60231 1041 aaKnown RBP20.03■□□□□ 0.8
SMC4-226ENST00000497311 MYL3P08590 195 aa20.03■□□□□ 0.8
SMC4-226ENST00000497311 PDE4AP27815 886 aa20.03■□□□□ 0.8
SMC4-226ENST00000497311 PURAQ00577 322 aaKnown RBP20.03■□□□□ 0.8
SMC4-226ENST00000497311 RASIP1Q5U651 963 aa20.03■□□□□ 0.8
SMC4-226ENST00000497311 IL25Q9H293 177 aa20.03■□□□□ 0.8
SMC4-226ENST00000497311 ALDH8A1Q9H2A2 487 aaPredicted RBP20.03■□□□□ 0.8
SMC4-226ENST00000497311 RAD50Q92878 1312 aa20.02■□□□□ 0.8
SMC4-226ENST00000497311 QRICH1Q2TAL8 776 aa20.02■□□□□ 0.8
SMC4-226ENST00000497311 IFIT1BQ5T764 474 aaKnown RBP20.02■□□□□ 0.8
SMC4-226ENST00000497311 TTC22Q5TAA0 569 aa20.02■□□□□ 0.8
SMC4-226ENST00000497311 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.8
SMC4-226ENST00000497311 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMC4-226ENST00000497311 MAFAQ8NHW3 353 aaPredicted RBP20.02■□□□□ 0.8
SMC4-226ENST00000497311 MTG1Q9BT17 334 aaPredicted RBP20.02■□□□□ 0.8
SMC4-226ENST00000497311 NOC4LQ9BVI4 516 aaKnown RBP20.02■□□□□ 0.8
SMC4-226ENST00000497311 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
SMC4-226ENST00000497311 UMODL1Q5DID0 1318 aa20.02■□□□□ 0.79
SMC4-226ENST00000497311 CDH23Q9H251 3354 aa20.01■□□□□ 0.79
SMC4-226ENST00000497311 FGBP02675 491 aa20.01■□□□□ 0.79
SMC4-226ENST00000497311 SUPT20HL2P0C7V6 817 aa20.01■□□□□ 0.79
SMC4-226ENST00000497311 TXNP10599 105 aaKnown RBP20.01■□□□□ 0.79
SMC4-226ENST00000497311 GSPT1P15170 499 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms