RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TRIM14Q14142 442 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 UBE2SQ16763 222 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 AOC3Q16853 763 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 PPP4R3AQ6IN85 833 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 TRIM65Q6PJ69 517 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 TOGARAM2Q6ZUX3 1019 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 MKL1Q969V6 931 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 VPS16Q9H269 839 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 THAP9Q9H5L6 903 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 STK17AQ9UEE5 414 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ATRNL1Q5VV63 1379 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 EDIL3O43854 480 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 GYPCP04921 128 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 EEF2P13639 858 aaKnown RBP14.64□□□□□ -0.07
GARNL3-220ENST00000496711 EEF1GP26641 437 aaKnown RBP14.64□□□□□ -0.07
GARNL3-220ENST00000496711 PPP1R2P41236 205 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 PDE4DQ08499 809 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 TATDN1Q6P1N9 297 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 SH3BP5LQ7L8J4 393 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 PDCL2Q8N4E4 241 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 NOC3LQ8WTT2 800 aaKnown RBP14.64□□□□□ -0.07
GARNL3-220ENST00000496711 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
GARNL3-220ENST00000496711 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 DNAI1Q9UI46 699 aa14.64□□□□□ -0.07
GARNL3-220ENST00000496711 CASP14P31944 242 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
GARNL3-220ENST00000496711 ICA1Q05084 483 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 GRB10Q13322 594 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 TMEM179Q6ZVK1 233 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 SUPT20HQ8NEM7 779 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 CDK5RAP3Q96JB5 506 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 GLT8D2Q9H1C3 349 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 BICDL2A1A5D9 508 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 SOWAHDA6NJG2 315 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 RAD21O60216 631 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 CCDC175P0C221 793 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 GCFC2P16383 781 aaKnown RBP14.63□□□□□ -0.07
GARNL3-220ENST00000496711 FECHP22830 423 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 RXRBP28702 533 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 SLC1A4P43007 532 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 PDIA5Q14554 519 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 CC2D2BQ6DHV5 1058 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 TTI2Q6NXR4 508 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 CPLX3Q8WVH0 158 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 C7orf43Q8WVR3 580 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 PNMA5Q96PV4 448 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 NAP1L4Q99733 375 aaKnown RBP14.63□□□□□ -0.07
GARNL3-220ENST00000496711 PSTPIP2Q9H939 334 aa14.63□□□□□ -0.07
GARNL3-220ENST00000496711 POTEMA6NI47 508 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 ENTPD3O75355 529 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 CCNE1P24864 410 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 FXR1P51114 621 aaKnown RBP eCLIP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 SLC15A2Q16348 729 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 COBLL1Q53SF7 1204 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 CCDC93Q567U6 631 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 CNNM4Q6P4Q7 775 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 SV2BQ7L1I2 683 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 SNX29Q8TEQ0 813 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 LARP4BQ92615 738 aaKnown RBP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 P2RX5Q93086 422 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 DESI2Q9BSY9 194 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
GARNL3-220ENST00000496711 MAGEC2Q9UBF1 373 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 DDX25Q9UHL0 483 aaKnown RBP14.62□□□□□ -0.07
GARNL3-220ENST00000496711 LGALS16A8MUM7 142 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 UBXN1Q04323 297 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 NAA30Q147X3 362 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 MTF1Q14872 753 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 SEPT2Q15019 361 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 SRRTQ9BXP5 876 aaKnown RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 KIF13BQ9NQT8 1826 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 PPIP5K2O43314 1243 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 STK4Q13043 487 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 ABCB5Q2M3G0 1257 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 TMEM119Q4V9L6 283 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 RAD9BQ6WBX8 426 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 FAM114A1Q8IWE2 563 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 CSGALNACT2Q8N6G5 542 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 GMCL1P1Q8NEA9 526 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 NUP88Q99567 741 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 CCDC94Q9BW85 323 aaPredicted RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 TDRD3Q9H7E2 651 aaKnown RBP14.61□□□□□ -0.07
GARNL3-220ENST00000496711 ABHD10Q9NUJ1 306 aa14.61□□□□□ -0.07
GARNL3-220ENST00000496711 A0A1W2PQC6 194 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 FANCGO15287 622 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 GDF11O95390 407 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 MCM6Q14566 821 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 UNC13DQ70J99 1090 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms