RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 STX10O60499 249 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
PDE6B-212ENST00000496514 SEPT2Q15019 361 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 ERO1AQ96HE7 468 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 TMX4Q9H1E5 349 aaPredicted RBP13.82□□□□□ -0.2
PDE6B-212ENST00000496514 MYH8P13535 1937 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 GABPAQ06546 454 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ECM1Q16610 540 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 CSGALNACT2Q8N6G5 542 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 CLRN2A0PK11 232 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 TTLL1O95922 423 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 STAT3P40763 770 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 ZNF569Q5MCW4 686 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 TRIM9Q9C026 710 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 JAG1P78504 1218 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 CCDC84Q86UT8 332 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-212ENST00000496514 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
PDE6B-212ENST00000496514 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 MAST2Q6P0Q8 1798 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 MYMKA6NI61 221 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 PBX1P40424 430 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 ZNF543Q08ER8 600 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 CCDC155Q8N6L0 562 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 NPR1P16066 1061 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 GRB10Q13322 594 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 MTERF4Q7Z6M4 381 aaKnown RBP13.8□□□□□ -0.2
PDE6B-212ENST00000496514 DAGLBQ8NCG7 672 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
PDE6B-212ENST00000496514 RIOX1Q9H6W3 641 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 KBTBD4Q9NVX7 518 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
PDE6B-212ENST00000496514 CCDC175P0C221 793 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 SLC1A4P43007 532 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 HINFPQ9BQA5 517 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 ECE2O60344 883 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 HLA-DOAP06340 250 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
PDE6B-212ENST00000496514 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
PDE6B-212ENST00000496514 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 UBXN4Q92575 508 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 PNMA5Q96PV4 448 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
PDE6B-212ENST00000496514 FGFBP2Q9BYJ0 223 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 L2HGDHQ9H9P8 463 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 ABHD10Q9NUJ1 306 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 RMND1Q9NWS8 449 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 GUCA1BQ9UMX6 200 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 TCP10L2B9ZVM9 353 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 ENC1O14682 589 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 PSMA7O14818 248 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 UBXN2AP68543 259 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 ANKRD20A12PQ8NF67 263 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 BCAS3Q9H6U6 928 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 ZNF446Q9NWS9 450 aa13.79□□□□□ -0.2
PDE6B-212ENST00000496514 E9PMD0 336 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 MEIS1O00470 390 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 C21orf2O43822 256 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 NELFCDQ8IXH7 590 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 SLC35F6Q8N357 371 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 FAM198AQ9UFP1 575 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 SYCP1Q15431 976 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 CNOT6LQ96LI5 555 aaKnown RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
PDE6B-212ENST00000496514 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 LIMA1Q9UHB6 759 aaKnown RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
PDE6B-212ENST00000496514 RAD17O75943 681 aa13.77□□□□□ -0.2
PDE6B-212ENST00000496514 TPM1P09493 284 aa13.77□□□□□ -0.2
PDE6B-212ENST00000496514 CLCN6P51797 869 aa13.77□□□□□ -0.2
PDE6B-212ENST00000496514 CYP27A1Q02318 531 aa13.77□□□□□ -0.2
PDE6B-212ENST00000496514 APBA1Q02410 837 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms