RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CABYRO75952 493 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 CD4P01730 458 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ALDH5A1P51649 535 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ZNF543Q08ER8 600 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 PPIGQ13427 754 aaKnown RBP eCLIP16.87■□□□□ 0.29
CXCL12-208ENST00000496375 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
CXCL12-208ENST00000496375 SLC30A10Q6XR72 485 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ESR2Q92731 530 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 PPP1R12CQ9BZL4 782 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 IL25Q9H293 177 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ADD3Q9UEY8 706 aaKnown RBP16.87■□□□□ 0.29
CXCL12-208ENST00000496375 Q9Y3F1 56 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 SNHG28P0DPA3 235 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 CSF2RAP15509 400 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 ITGA7Q13683 1181 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 TMEM199Q8N511 208 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 SLC43A3Q8NBI5 491 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 PRUNE2Q8WUY3 3088 aa16.86■□□□□ 0.29
CXCL12-208ENST00000496375 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 LOC102724159A0A0B4J2E5 919 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-208ENST00000496375 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-208ENST00000496375 CALML3P27482 149 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 CYP2C18P33260 490 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 PWP2Q15269 919 aaKnown RBP16.85■□□□□ 0.29
CXCL12-208ENST00000496375 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 C16orf59Q7L2K0 433 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 GRIN2DO15399 1336 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
CXCL12-208ENST00000496375 SGSM2O43147 1006 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 ACRP10323 421 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 PSMC6P62333 389 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
CXCL12-208ENST00000496375 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
CXCL12-208ENST00000496375 WDR11Q9BZH6 1224 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 CUL9Q8IWT3 2517 aa16.84■□□□□ 0.29
CXCL12-208ENST00000496375 RBM47A0AV96 593 aaKnown RBP16.83■□□□□ 0.28
CXCL12-208ENST00000496375 KDM4AO75164 1064 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 DNAJB2P25686 324 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 NT5C2P49902 561 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.28
CXCL12-208ENST00000496375 PSRC1Q6PGN9 363 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-208ENST00000496375 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 MAFAQ8NHW3 353 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-208ENST00000496375 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 HIPK3Q9H422 1215 aa16.83■□□□□ 0.28
CXCL12-208ENST00000496375 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 B4GALT4O60513 344 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 FOSL2P15408 326 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 PDE4DQ08499 809 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 USH1GQ495M9 461 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 OR6J1Q8NGC5 347 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
CXCL12-208ENST00000496375 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
CXCL12-208ENST00000496375 B4E1Z4 1266 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 EDNRBP24530 442 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
CXCL12-208ENST00000496375 DNERQ8NFT8 737 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 TIFAQ96CG3 184 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 ZSCAN10Q96SZ4 725 aaPredicted RBP16.81■□□□□ 0.28
CXCL12-208ENST00000496375 IL23AQ9NPF7 189 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 POLR3EQ9NVU0 708 aa16.81■□□□□ 0.28
CXCL12-208ENST00000496375 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 CPT1AP50416 773 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 CCL23P55773 120 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 GRIN2CQ14957 1233 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-208ENST00000496375 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-208ENST00000496375 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
CXCL12-208ENST00000496375 ALDH8A1Q9H2A2 487 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-208ENST00000496375 ZSWIM5Q9P217 1185 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 VCANP13611 3396 aa16.8■□□□□ 0.28
CXCL12-208ENST00000496375 TNKSO95271 1327 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 B4DLN1 442 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 CDC45O75419 566 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 MYL3P08590 195 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 PBX2P40425 430 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms