RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 RTN1Q16799 776 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 UBE2Q1Q7Z7E8 422 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
COL9A2-210ENST00000495948 SEC63Q9UGP8 760 aaKnown RBP23.22■■□□□ 1.31
COL9A2-210ENST00000495948 PCDHA1Q9Y5I3 950 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 CNTNAP5Q8WYK1 1306 aa23.22■■□□□ 1.31
COL9A2-210ENST00000495948 MCM3APO60318 1980 aa23.21■■□□□ 1.31
COL9A2-210ENST00000495948 FARP2O94887 1054 aaPredicted RBP23.21■■□□□ 1.31
COL9A2-210ENST00000495948 SNAI1O95863 264 aaPredicted RBP23.21■■□□□ 1.31
COL9A2-210ENST00000495948 TFRCP02786 760 aaKnown RBP23.21■■□□□ 1.31
COL9A2-210ENST00000495948 ZNF865P0CJ78 1059 aaPredicted RBP23.21■■□□□ 1.31
COL9A2-210ENST00000495948 APOBRQ0VD83 1088 aa23.21■■□□□ 1.31
COL9A2-210ENST00000495948 PPP2R5BQ15173 497 aa23.21■■□□□ 1.31
COL9A2-210ENST00000495948 MORC4Q8TE76 937 aa23.21■■□□□ 1.31
COL9A2-210ENST00000495948 ABHD16BQ9H3Z7 469 aa23.21■■□□□ 1.31
COL9A2-210ENST00000495948 OPLAHO14841 1288 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 AKR1A1P14550 325 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 CALML3P27482 149 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 METAP2P50579 478 aaKnown RBP eCLIP23.2■■□□□ 1.3
COL9A2-210ENST00000495948 ALDH5A1P51649 535 aaPredicted RBP23.2■■□□□ 1.3
COL9A2-210ENST00000495948 PRAMEF19Q5SWL8 479 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 SAMD3Q8N6K7 520 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 DNERQ8NFT8 737 aa23.2■■□□□ 1.3
COL9A2-210ENST00000495948 UPF3BQ9BZI7 483 aaKnown RBP23.2■■□□□ 1.3
COL9A2-210ENST00000495948 ZHX1Q9UKY1 873 aaPredicted RBP23.2■■□□□ 1.3
COL9A2-210ENST00000495948 BAZ2BQ9UIF8 2168 aaKnown RBP23.2■■□□□ 1.3
COL9A2-210ENST00000495948 EVCP57679 992 aa23.19■■□□□ 1.3
COL9A2-210ENST00000495948 KATNBL1Q9H079 304 aa23.19■■□□□ 1.3
COL9A2-210ENST00000495948 MAP3K20Q9NYL2 800 aaKnown RBP23.19■■□□□ 1.3
COL9A2-210ENST00000495948 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
COL9A2-210ENST00000495948 SEC24BO95487 1268 aa23.18■■□□□ 1.3
COL9A2-210ENST00000495948 HSD17B4P51659 736 aa23.18■■□□□ 1.3
COL9A2-210ENST00000495948 ACVR2BQ13705 512 aa23.18■■□□□ 1.3
COL9A2-210ENST00000495948 TOB2Q14106 344 aaPredicted RBP23.18■■□□□ 1.3
COL9A2-210ENST00000495948 CMTR1Q8N1G2 835 aaKnown RBP23.18■■□□□ 1.3
COL9A2-210ENST00000495948 SYTL5Q8TDW5 730 aaPredicted RBP23.18■■□□□ 1.3
COL9A2-210ENST00000495948 PURBQ96QR8 312 aaKnown RBP23.18■■□□□ 1.3
COL9A2-210ENST00000495948 MPHOSPH6Q99547 160 aaKnown RBP23.18■■□□□ 1.3
COL9A2-210ENST00000495948 EDNRBP24530 442 aa23.17■■□□□ 1.3
COL9A2-210ENST00000495948 FUT2Q10981 343 aa23.17■■□□□ 1.3
COL9A2-210ENST00000495948 PIBF1Q8WXW3 757 aa23.17■■□□□ 1.3
COL9A2-210ENST00000495948 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
COL9A2-210ENST00000495948 NAP1L2Q9ULW6 460 aaPredicted RBP23.17■■□□□ 1.3
COL9A2-210ENST00000495948 MKI67P46013 3256 aaKnown RBP23.17■■□□□ 1.3
COL9A2-210ENST00000495948 CFBP00751 764 aa23.16■■□□□ 1.3
COL9A2-210ENST00000495948 RARBP10826 455 aa23.16■■□□□ 1.3
COL9A2-210ENST00000495948 CDC27P30260 824 aa23.16■■□□□ 1.3
COL9A2-210ENST00000495948 MNX1P50219 401 aaPredicted RBP23.16■■□□□ 1.3
COL9A2-210ENST00000495948 VTA1Q9NP79 307 aa23.16■■□□□ 1.3
COL9A2-210ENST00000495948 FAM184BQ9ULE4 1060 aa23.16■■□□□ 1.3
COL9A2-210ENST00000495948 B4DLN1 442 aa23.15■■□□□ 1.3
COL9A2-210ENST00000495948 MRPL12P52815 198 aaKnown RBP23.15■■□□□ 1.3
COL9A2-210ENST00000495948 TBC1D5Q92609 795 aa23.15■■□□□ 1.3
COL9A2-210ENST00000495948 PDRG1Q9NUG6 133 aa23.15■■□□□ 1.3
COL9A2-210ENST00000495948 COL20A1Q9P218 1284 aa23.15■■□□□ 1.3
COL9A2-210ENST00000495948 hCG_1984214I3L0E3 225 aa23.14■■□□□ 1.29
COL9A2-210ENST00000495948 FBXO16Q8IX29 292 aaPredicted RBP23.14■■□□□ 1.29
COL9A2-210ENST00000495948 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
COL9A2-210ENST00000495948 ZNF713Q8N859 430 aaPredicted RBP23.14■■□□□ 1.29
COL9A2-210ENST00000495948 DIS3LQ8TF46 1054 aaKnown RBP23.14■■□□□ 1.29
COL9A2-210ENST00000495948 XPNPEP3Q9NQH7 507 aa23.14■■□□□ 1.29
COL9A2-210ENST00000495948 DNM1LO00429 736 aa23.13■■□□□ 1.29
COL9A2-210ENST00000495948 PDIA3P30101 505 aaKnown RBP23.13■■□□□ 1.29
COL9A2-210ENST00000495948 CCDC144BQ3MJ40 725 aa23.13■■□□□ 1.29
COL9A2-210ENST00000495948 ANO1Q5XXA6 986 aa23.13■■□□□ 1.29
COL9A2-210ENST00000495948 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
COL9A2-210ENST00000495948 NSUN6Q8TEA1 469 aaKnown RBP23.13■■□□□ 1.29
COL9A2-210ENST00000495948 DDX49Q9Y6V7 483 aaKnown RBP23.13■■□□□ 1.29
COL9A2-210ENST00000495948 GCOM1H8Y6P7 765 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 POLR2MP0CAP2 368 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 ADD1P35611 737 aaKnown RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 PDE4DQ08499 809 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 PPP1R18Q6NYC8 613 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 ARRDC4Q8NCT1 418 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 LENG1Q96BZ8 264 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 ZNF274Q96GC6 653 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 PAWRQ96IZ0 340 aaKnown RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 TAAR1Q96RJ0 339 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 RMDN3Q96TC7 470 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 ALDH8A1Q9H2A2 487 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
COL9A2-210ENST00000495948 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
COL9A2-210ENST00000495948 FRMPD4Q14CM0 1322 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 SYNRGQ9UMZ2 1314 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 hCG_1642624A0A1W2PR95 340 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 ADCY6O43306 1168 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 DUSP11O75319 330 aaKnown RBP23.11■■□□□ 1.29
COL9A2-210ENST00000495948 COL6A1P12109 1028 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 IWS1Q96ST2 819 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 HTATIP2Q9BUP3 242 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 C11orf49Q9H6J7 331 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 PXMP2Q9NR77 195 aa23.11■■□□□ 1.29
COL9A2-210ENST00000495948 KBTBD13C9JR72 458 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 PIK3CDO00329 1044 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 ADAMTS4O75173 837 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 HOXA13P31271 388 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-210ENST00000495948 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 LRRC41Q15345 812 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 ARHGEF16Q5VV41 709 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms