RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
BRD3-206ENST00000494743 FTOQ9C0B1 505 aaKnown RBP eCLIP13.84□□□□□ -0.19
BRD3-206ENST00000494743 ZCCHC17Q9NP64 241 aaKnown RBP13.84□□□□□ -0.19
BRD3-206ENST00000494743 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
BRD3-206ENST00000494743 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
BRD3-206ENST00000494743 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
BRD3-206ENST00000494743 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
BRD3-206ENST00000494743 CTDP1Q9Y5B0 961 aaPredicted RBP13.84□□□□□ -0.19
BRD3-206ENST00000494743 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
BRD3-206ENST00000494743 PEX10O60683 326 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 ALAS1P13196 640 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 STAT3P40763 770 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 KRT85P78386 507 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 AP3B2Q13367 1082 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 TBC1D5Q92609 795 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.2
BRD3-206ENST00000494743 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 SPATC1LQ9H0A9 340 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 RTEL1Q9NZ71 1219 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 CNPY2Q9Y2B0 182 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 ADGRA2Q96PE1 1338 aa13.83□□□□□ -0.2
BRD3-206ENST00000494743 CCDC194A0A1B0GVG4 234 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
BRD3-206ENST00000494743 WNT7AO00755 349 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 EDIL3O43854 480 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
BRD3-206ENST00000494743 INHBEP58166 350 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 NBR1Q14596 966 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 NONOQ15233 471 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRD3-206ENST00000494743 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRD3-206ENST00000494743 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
BRD3-206ENST00000494743 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
BRD3-206ENST00000494743 YEATS4O95619 227 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 CFBP00751 764 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 HOXA13P31271 388 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 MCM4P33991 863 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 TM4SF4P48230 202 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 SREBF2Q12772 1141 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 INF2Q27J81 1249 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 ANO1Q5XXA6 986 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 SMCR8Q8TEV9 937 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 LEO1Q8WVC0 666 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 CRYGNQ8WXF5 182 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 PGBD1Q96JS3 809 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 ZIC5Q96T25 663 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 MOV10L1Q9BXT6 1211 aaKnown RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 SCAND2PQ9GZW5 306 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 MAF1Q9H063 256 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 MORF4L1Q9UBU8 362 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 RCOR1Q9UKL0 485 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
BRD3-206ENST00000494743 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
BRD3-206ENST00000494743 FIBPO43427 364 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 SLC25A27O95847 323 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
BRD3-206ENST00000494743 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 ERVK-24P63145 666 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 PLS1Q14651 629 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 PTPAQ15257 358 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 NFKBIBQ15653 356 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 Q3C1V9 767 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
BRD3-206ENST00000494743 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 PCDHB6Q9Y5E3 794 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 ELP1O95163 1332 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 FRMPD4Q14CM0 1322 aa13.8□□□□□ -0.2
BRD3-206ENST00000494743 COL11A1P12107 1806 aaPredicted RBP13.8□□□□□ -0.2
BRD3-206ENST00000494743 COPB2P35606 906 aa13.79□□□□□ -0.2
BRD3-206ENST00000494743 SREBF1P36956 1147 aa13.79□□□□□ -0.2
BRD3-206ENST00000494743 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
BRD3-206ENST00000494743 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
BRD3-206ENST00000494743 NOGQ13253 232 aa13.79□□□□□ -0.2
BRD3-206ENST00000494743 SF3A1Q15459 793 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms