RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 NUP88Q99567 741 aaPredicted RBP8.24□□□□□ -1.09
FN1-225ENST00000494446 SLF1Q9BQI6 1058 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 GOPCQ9HD26 462 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 PDGFCQ9NRA1 345 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 CHD6Q8TD26 2715 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
FN1-225ENST00000494446 MYO10Q9HD67 2058 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 PRR23AA6NEV1 266 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 STXBP3O00186 592 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 GALR2O43603 387 aaPredicted RBP8.23□□□□□ -1.09
FN1-225ENST00000494446 ZBED4O75132 1171 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 GJB5O95377 273 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 BFSP2Q13515 415 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 SMAD2Q15796 467 aaKnown RBP8.23□□□□□ -1.09
FN1-225ENST00000494446 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 IQSEC1Q6DN90 963 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 EEPD1Q7L9B9 569 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 RPAINQ86UA6 219 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 MEIS3Q99687 375 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 RAVER2Q9HCJ3 691 aaKnown RBP8.23□□□□□ -1.09
FN1-225ENST00000494446 ALG13Q9NP73 1137 aaKnown RBP8.23□□□□□ -1.09
FN1-225ENST00000494446 HOMER2Q9NSB8 354 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 POLR3EQ9NVU0 708 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 NOD1Q9Y239 953 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 DDX49Q9Y6V7 483 aaKnown RBP8.23□□□□□ -1.09
FN1-225ENST00000494446 ACACBO00763 2458 aa8.23□□□□□ -1.09
FN1-225ENST00000494446 EP300Q09472 2414 aaPredicted RBP8.22□□□□□ -1.09
FN1-225ENST00000494446 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 MED19A0JLT2 244 aaPredicted RBP8.22□□□□□ -1.09
FN1-225ENST00000494446 PROB1E7EW31 1015 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 MBTPS2O43462 519 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 IGSF3O75054 1194 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 KDM4AO75164 1064 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 RGS20O76081 388 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 AVPR2P30518 371 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 CHMP4BP1P59074 171 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 ZXDAP98168 799 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 GPM6BQ13491 265 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 MTG1Q9BT17 334 aaPredicted RBP8.22□□□□□ -1.09
FN1-225ENST00000494446 FSD1Q9BTV5 496 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 CRNKL1Q9BZJ0 848 aaKnown RBP8.22□□□□□ -1.09
FN1-225ENST00000494446 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
FN1-225ENST00000494446 SWAP70Q9UH65 585 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 FBXO40Q9UH90 709 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 Q9Y3F1 56 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 MYH7BA7E2Y1 1941 aa8.22□□□□□ -1.09
FN1-225ENST00000494446 ASB14A6NK59 587 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 LTBRP36941 435 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 PURAQ00577 322 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 TCTN1Q2MV58 587 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 LRRFIP1Q32MZ4 808 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 EPC2Q52LR7 807 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 DIEXFQ68CQ4 756 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 TAPT1Q6NXT6 567 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 CNKSR3Q6P9H4 555 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 FBXO16Q8IX29 292 aaPredicted RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 CHST13Q8NET6 341 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 SDR42E1Q8WUS8 393 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 KIFC2Q96AC6 838 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 CCDC17Q96LX7 622 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 RIOK1Q9BRS2 568 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 NSUN3Q9H649 340 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 INSL6Q9Y581 213 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 DMDP11532 3685 aa8.21□□□□□ -1.1
FN1-225ENST00000494446 MAP1BP46821 2468 aaKnown RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.1
FN1-225ENST00000494446 ABHD14A-ACY1A0A1B0GW23 586 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 USP17L21D6R901 530 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 E9PSI1 815 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 RBAK-RBAKDNI3L0D1 243 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 ATP2A1O14983 1001 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 NCK2O43639 380 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 CDK8P49336 464 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 CPT1AP50416 773 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 DLX2Q07687 328 aaPredicted RBP8.2□□□□□ -1.1
FN1-225ENST00000494446 OS9Q13438 667 aaPredicted RBP8.2□□□□□ -1.1
FN1-225ENST00000494446 IKBKEQ14164 716 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 COL19A1Q14993 1142 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.2□□□□□ -1.16e-8■□□□□ 10.2
FN1-225ENST00000494446 ADSSL1Q8N142 457 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 CCDC155Q8N6L0 562 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 FAM133AQ8N9E0 248 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 AFAP1L1Q8TED9 768 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 ZNF512BQ96KM6 892 aaPredicted RBP8.2□□□□□ -1.1
FN1-225ENST00000494446 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
FN1-225ENST00000494446 MYH7P12883 1935 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SPTBN2O15020 2390 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 CEP250Q9BV73 2442 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 H3BNC9 293 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SELPP16109 830 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms