RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 CBX4O00257 560 aa8□□□□□ -1.13
SNX13-210ENST00000494402 GOLIM4O00461 696 aa8□□□□□ -1.13
SNX13-210ENST00000494402 MAFKO60675 156 aa8□□□□□ -1.13
SNX13-210ENST00000494402 EPHX1P07099 455 aa8□□□□□ -1.13
SNX13-210ENST00000494402 PSAPP07602 524 aa8□□□□□ -1.13
SNX13-210ENST00000494402 HNRNPCP07910 306 aaKnown RBP eCLIP8□□□□□ -1.13
SNX13-210ENST00000494402 RARAP10276 462 aa8□□□□□ -1.13
SNX13-210ENST00000494402 RAG1P15918 1043 aa8□□□□□ -1.13
SNX13-210ENST00000494402 RPS6KB1P23443 525 aa8□□□□□ -1.13
SNX13-210ENST00000494402 RAD52P43351 418 aa8□□□□□ -1.13
SNX13-210ENST00000494402 CLK1P49759 484 aaKnown RBP8□□□□□ -1.13
SNX13-210ENST00000494402 ZNF252P-AS1Q0IIN9 211 aa8□□□□□ -1.13
SNX13-210ENST00000494402 ZNF267Q14586 743 aaPredicted RBP8□□□□□ -1.13
SNX13-210ENST00000494402 DGKKQ5KSL6 1271 aa8□□□□□ -1.13
SNX13-210ENST00000494402 Q6ZVU0 165 aa8□□□□□ -1.13
SNX13-210ENST00000494402 GPR155Q7Z3F1 870 aa8□□□□□ -1.13
SNX13-210ENST00000494402 KRT25Q7Z3Z0 450 aa8□□□□□ -1.13
SNX13-210ENST00000494402 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
SNX13-210ENST00000494402 ZBTB34Q8NCN2 500 aa8□□□□□ -1.13
SNX13-210ENST00000494402 STK35Q8TDR2 534 aa8□□□□□ -1.13
SNX13-210ENST00000494402 NELL2Q99435 816 aa8□□□□□ -1.13
SNX13-210ENST00000494402 CENPOQ9BU64 300 aa8□□□□□ -1.13
SNX13-210ENST00000494402 VPS11Q9H270 941 aa8□□□□□ -1.13
SNX13-210ENST00000494402 BRD7Q9NPI1 651 aa8□□□□□ -1.13
SNX13-210ENST00000494402 TMX2Q9Y320 296 aa8□□□□□ -1.13
SNX13-210ENST00000494402 CORINQ9Y5Q5 1042 aa8□□□□□ -1.13
SNX13-210ENST00000494402 PDE2AO00408 941 aaPredicted RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 SIAH2O43255 324 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA12O60330 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 CD4P01730 458 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PLCG1P19174 1290 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 TSPAN7P41732 249 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PHKA2P46019 1235 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 STT3AP46977 705 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PMS1P54277 932 aaKnown RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 RELBQ01201 579 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 SEMA5AQ13591 1074 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 KIAA0753Q2KHM9 967 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 ZNF697Q5TEC3 545 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 FASTKD5Q7L8L6 764 aaKnown RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 DPP9Q86TI2 863 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 FRS2Q8WU20 508 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 ATRIPQ8WXE1 791 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 DIO2Q92813 273 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 MRGPRX2Q96LB1 330 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 AGBL1Q96MI9 1066 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 RIPOR3Q96MK2 946 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 HAUS7Q99871 368 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 NUDT16L1Q9BRJ7 211 aaKnown RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 PRKRIP1Q9H875 184 aaPredicted RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 CRYL1Q9Y2S2 319 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGB6Q9Y5F9 930 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA9Q9Y5G4 932 aaKnown RBP7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA7Q9Y5G6 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA6Q9Y5G7 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA3Q9Y5H0 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 PCDHGA2Q9Y5H1 932 aa7.99□□□□□ -1.13
SNX13-210ENST00000494402 RRN3P2A6NIE6 340 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 FAM227AF5H4B4 570 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 NFKBIEO00221 500 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 GFRA2O00451 464 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 DLX3O60479 287 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 B3GALT4O96024 378 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 MYBP10242 640 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 OAS2P29728 719 aaKnown RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 ADD2P35612 726 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 IL6STP40189 918 aaPredicted RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 PDE4BQ07343 736 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 CCINQ13939 588 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 LLGL1Q15334 1064 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 WIPI1Q5MNZ9 446 aaPredicted RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 PTRH1Q86Y79 214 aaKnown RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 CLRN3Q8NCR9 226 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 DDX11Q96FC9 970 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 UBXN10Q96LJ8 280 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 ACO2Q99798 780 aaKnown RBP7.98□□□□□ -1.13
SNX13-210ENST00000494402 RTEL1Q9NZ71 1219 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
SNX13-210ENST00000494402 ANKRD18BA2A2Z9 1011 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 BLACEA4D250 179 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 TTC36A6NLP5 189 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 NOP56O00567 594 aaKnown RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 PLOD3O60568 738 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 DNAJA2O60884 412 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 GFPT2O94808 682 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 CRTAMO95727 393 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 NAT1P18440 290 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 SMARCA1P28370 1054 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 PPM1AP35813 382 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 PFKPQ01813 784 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 BLMHQ13867 455 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms