RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 C21orf2O43822 256 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 NDUFA10O95299 355 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 TROAPQ12815 778 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 DPYDQ12882 1025 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 SEMA3FQ13275 785 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 STRIP1Q5VSL9 837 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
SYP-208ENST00000494396 RNF26Q9BY78 433 aaPredicted RBP18.54■□□□□ 0.56
SYP-208ENST00000494396 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
SYP-208ENST00000494396 DDAH1O94760 285 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 CALM1P0DP23 149 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 CALM2P0DP24 149 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 CALM3P0DP25 149 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 GSCP56915 257 aaPredicted RBP18.53■□□□□ 0.56
SYP-208ENST00000494396 FKBP1AP62942 108 aaKnown RBP18.53■□□□□ 0.56
SYP-208ENST00000494396 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 MKNK2Q9HBH9 465 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 ZNF287Q9HBT7 754 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 GOLGA6CA6NDK9 693 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 KRT86O43790 486 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 OPA1O60313 960 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 GOLGA6DP0CG33 693 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 AOC3Q16853 763 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 TSR1Q2NL82 804 aaKnown RBP18.53■□□□□ 0.56
SYP-208ENST00000494396 FAM47AQ5JRC9 791 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 SPECC1Q5M775 1068 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 HHIPL2Q6UWX4 724 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 TEKT1Q969V4 418 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 PAGE5Q96GU1 130 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 CSRNP2Q9H175 543 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 RBM28Q9NW13 759 aaKnown RBP18.53■□□□□ 0.56
SYP-208ENST00000494396 GOLGA6AQ9NYA3 693 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 FAM184BQ9ULE4 1060 aa18.53■□□□□ 0.56
SYP-208ENST00000494396 A0A1W2PQC6 194 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 XBP1P17861 261 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 KRT9P35527 623 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 FUT2Q10981 343 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 KRT31Q15323 416 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 CCNI2Q6ZMN8 369 aaPredicted RBP18.52■□□□□ 0.56
SYP-208ENST00000494396 MICALL1Q8N3F8 863 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 OR8K1Q8NGG5 319 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 KCNQ5Q9NR82 932 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 KCNJ14Q9UNX9 436 aa18.52■□□□□ 0.56
SYP-208ENST00000494396 A0A0U1RQJ8 604 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 USP17L3A6NCW0 530 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 USP17L4A6NCW7 530 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 GOLGA6BA6NDN3 693 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 TRIM75PA6NK02 468 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 NMT2O60551 498 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 DPEP1P16444 411 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 SCNN1DP51172 638 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 IRAK1P51617 712 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 COPB1P53618 953 aaKnown RBP18.51■□□□□ 0.55
SYP-208ENST00000494396 B4GALNT4Q76KP1 1039 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 USP17L1Q7RTZ2 530 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 ATRIPQ8WXE1 791 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 DRC1Q96MC2 740 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 DNAJC7Q99615 494 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 RMND1Q9NWS8 449 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 EPB41P11171 864 aaKnown RBP18.51■□□□□ 0.55
SYP-208ENST00000494396 CD44P16070 742 aaKnown RBP18.51■□□□□ 0.55
SYP-208ENST00000494396 TFAP4Q01664 338 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 A1CFQ9NQ94 594 aaKnown RBP18.51■□□□□ 0.55
SYP-208ENST00000494396 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
SYP-208ENST00000494396 PPIP5K2O43314 1243 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 PRPF3O43395 683 aaKnown RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 GGCXP38435 758 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 MMP14P50281 582 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 GRIN1Q05586 938 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 GRAMD1CQ8IYS0 662 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 SLF1Q9BQI6 1058 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 SELENOOQ9BVL4 669 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 CAPS2Q9BXY5 557 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 FAM169AQ9Y6X4 670 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 EIF3HO15372 352 aaKnown RBP eCLIP18.5■□□□□ 0.55
SYP-208ENST00000494396 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 KCNA3P22001 575 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 PKN1Q16512 942 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 TCP11X2Q5H9J9 407 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 ZNF572Q7Z3I7 529 aaPredicted RBP18.5■□□□□ 0.55
SYP-208ENST00000494396 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 USP40Q9NVE5 1235 aa18.5■□□□□ 0.55
SYP-208ENST00000494396 DDX60LQ5H9U9 1706 aaKnown RBP18.49■□□□□ 0.55
SYP-208ENST00000494396 H7C1D1 291 aa18.49■□□□□ 0.55
SYP-208ENST00000494396 ZEB2O60315 1214 aa18.49■□□□□ 0.55
SYP-208ENST00000494396 PAK1Q13153 545 aa18.49■□□□□ 0.55
SYP-208ENST00000494396 ALS2CLQ60I27 953 aa18.49■□□□□ 0.55
SYP-208ENST00000494396 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
SYP-208ENST00000494396 TMTC3Q6ZXV5 915 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms