RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TCP11L1Q9NUJ3 509 aa20.49■□□□□ 0.87
COL9A1-210ENST00000493682 ADD3Q9UEY8 706 aaKnown RBP20.49■□□□□ 0.87
COL9A1-210ENST00000493682 FGBP02675 491 aa20.48■□□□□ 0.87
COL9A1-210ENST00000493682 HSPD1P10809 573 aaKnown RBP20.48■□□□□ 0.87
COL9A1-210ENST00000493682 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
COL9A1-210ENST00000493682 CCL23P55773 120 aa20.48■□□□□ 0.87
COL9A1-210ENST00000493682 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
COL9A1-210ENST00000493682 OTOP2Q7RTS6 562 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 CLEC4DQ8WXI8 215 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 WDR11Q9BZH6 1224 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 MTIF3Q9H2K0 278 aaKnown RBP20.47■□□□□ 0.87
COL9A1-210ENST00000493682 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 MSRAQ9UJ68 235 aa20.47■□□□□ 0.87
COL9A1-210ENST00000493682 LOC102724159A0A0B4J2E5 919 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 PTPDC1A2A3K4 754 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 PDHBP11177 359 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 HAND2P61296 217 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 PWP2Q15269 919 aaKnown RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 RAB30Q15771 203 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 SLC30A10Q6XR72 485 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 ZNF589Q86UQ0 364 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 TICAM2Q86XR7 235 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 SYMPKQ92797 1274 aaKnown RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 GAS2L1Q99501 681 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 ALDH8A1Q9H2A2 487 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
COL9A1-210ENST00000493682 ZMYM6O95789 1325 aa20.46■□□□□ 0.87
COL9A1-210ENST00000493682 CHD9Q3L8U1 2897 aa20.45■□□□□ 0.86
COL9A1-210ENST00000493682 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
COL9A1-210ENST00000493682 NMIQ13287 307 aaPredicted RBP20.45■□□□□ 0.86
COL9A1-210ENST00000493682 CALML3P27482 149 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 PURAQ00577 322 aaKnown RBP20.44■□□□□ 0.86
COL9A1-210ENST00000493682 ZNF543Q08ER8 600 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 VWCEQ96DN2 955 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 TTC14Q96N46 770 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 NKX2-4Q9H2Z4 354 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 PRDM6Q9NQX0 595 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 PNMA2Q9UL42 364 aa20.44■□□□□ 0.86
COL9A1-210ENST00000493682 SNHG28P0DPA3 235 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 CPT1AP50416 773 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 ADGRE1Q14246 886 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 TJAP1Q5JTD0 557 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 MFSD6Q6ZSS7 791 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 RPUSD2Q8IZ73 545 aaKnown RBP20.43■□□□□ 0.86
COL9A1-210ENST00000493682 OR6J1Q8NGC5 347 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 PPM1EQ8WY54 764 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 SCLYQ96I15 445 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 TRMT13Q9NUP7 481 aaKnown RBP20.43■□□□□ 0.86
COL9A1-210ENST00000493682 YBX2Q9Y2T7 364 aaKnown RBP20.43■□□□□ 0.86
COL9A1-210ENST00000493682 CCDC171Q6TFL3 1326 aa20.43■□□□□ 0.86
COL9A1-210ENST00000493682 MYL3P08590 195 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 SUPT20HL2P0C7V6 817 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 PCP11498 1178 aaKnown RBP20.42■□□□□ 0.86
COL9A1-210ENST00000493682 CYP2C9P11712 490 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 RPS6P62753 249 aaKnown RBP20.42■□□□□ 0.86
COL9A1-210ENST00000493682 PDE4DQ08499 809 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 MTG1Q9BT17 334 aaPredicted RBP20.42■□□□□ 0.86
COL9A1-210ENST00000493682 SLC28A3Q9HAS3 691 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 SLC4A7Q9Y6M7 1214 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
COL9A1-210ENST00000493682 TRIM6-TRIM34B2RNG4 842 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 EDNRBP24530 442 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 RABGGTBP53611 331 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 GPHNQ9NQX3 736 aaPredicted RBP20.41■□□□□ 0.86
COL9A1-210ENST00000493682 TNKSO95271 1327 aa20.41■□□□□ 0.86
COL9A1-210ENST00000493682 PPP2R5BQ15173 497 aa20.4■□□□□ 0.86
COL9A1-210ENST00000493682 DNERQ8NFT8 737 aa20.4■□□□□ 0.86
COL9A1-210ENST00000493682 SCFD2Q8WU76 684 aa20.4■□□□□ 0.86
COL9A1-210ENST00000493682 MPHOSPH6Q99547 160 aaKnown RBP20.4■□□□□ 0.86
COL9A1-210ENST00000493682 NEDD4P46934 1319 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 RAD50Q92878 1312 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 ZBBXA8MT70 800 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 NKRFO15226 690 aaKnown RBP eCLIP20.39■□□□□ 0.85
COL9A1-210ENST00000493682 GOLGA8HP0CJ92 632 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 IGFBP4P22692 258 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 NBPF20Q3BBV1 942 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 BRDTQ58F21 947 aaPredicted RBP20.39■□□□□ 0.85
COL9A1-210ENST00000493682 GPATCH4Q5T3I0 446 aaKnown RBP20.39■□□□□ 0.85
COL9A1-210ENST00000493682 ESR2Q92731 530 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 COPS5Q92905 334 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 ZKSCAN3Q9BRR0 538 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.85
COL9A1-210ENST00000493682 GBF1Q92538 1859 aa20.39■□□□□ 0.85
COL9A1-210ENST00000493682 A6NJR5 290 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 KPNA6O60684 536 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 PFKMP08237 780 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 MYOGP15173 224 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 SDSP20132 328 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
COL9A1-210ENST00000493682 TTLL4Q14679 1199 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms