RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 MORC4Q8TE76 937 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 RILPL2Q969X0 211 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 Q9Y3F1 56 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 MYO9BQ13459 2157 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 GRIN2DO15399 1336 aa12.09□□□□□ -0.47
NUDCD3-210ENST00000493613 PDHBP11177 359 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 PSMC6P62333 389 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 DUSP28Q4G0W2 176 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 AKNAD1Q5T1N1 836 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 RASIP1Q5U651 963 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 TIFAQ96CG3 184 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 TTC14Q96N46 770 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 SEZ6LQ9BYH1 1024 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 ZNF576Q9H609 170 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
NUDCD3-210ENST00000493613 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 GRXCR1A8MXD5 290 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 B4GALT4O60513 344 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 CALML3P27482 149 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 PBX2P40425 430 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 ZNF543Q08ER8 600 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 PWP2Q15269 919 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 RNF207Q6ZRF8 634 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 MUC3AQ02505 3323 aa12.07□□□□□ -0.48
NUDCD3-210ENST00000493613 FGBP02675 491 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 CPT1AP50416 773 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 CCL23P55773 120 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 CLEC4DQ8WXI8 215 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 ESR2Q92731 530 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 MPHOSPH6Q99547 160 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 ZKSCAN3Q9BRR0 538 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 RWDD1Q9H446 243 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 NEDD4P46934 1319 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
NUDCD3-210ENST00000493613 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 RBM47A0AV96 593 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 ZNF213O14771 459 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 SDSP20132 328 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 PURAQ00577 322 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 PDE4DQ08499 809 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 AAMPQ13685 434 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 USH1GQ495M9 461 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 CHD1LQ86WJ1 897 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 HERVK_113Q902F9 699 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 GAS2L1Q99501 681 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 ALDH8A1Q9H2A2 487 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 RAD50Q92878 1312 aa12.05□□□□□ -0.48
NUDCD3-210ENST00000493613 DOCK5Q9H7D0 1870 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 IGHDP01880 384 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 MYL3P08590 195 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 RAB30Q15771 203 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 DGKHQ86XP1 1220 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 DNERQ8NFT8 737 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 OR6J1Q8NGC5 347 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 MSRAQ9UJ68 235 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 TNKSO95271 1327 aa12.04□□□□□ -0.48
NUDCD3-210ENST00000493613 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 B4DLN1 442 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 NKRFO15226 690 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 KDM4AO75164 1064 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 SUPT20HL2P0C7V6 817 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 EDNRBP24530 442 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 MRPL12P52815 198 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 NUCB1Q02818 461 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
NUDCD3-210ENST00000493613 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms