RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CD4P01730 458 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 ITGA7Q13683 1181 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 SLC30A10Q6XR72 485 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 RNF207Q6ZRF8 634 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 KIAA1211Q6ZU35 1233 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 DGKHQ86XP1 1220 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 SLC43A3Q8NBI5 491 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 EXOC6Q8TAG9 804 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
PTPRU-208ENST00000493601 CDX2Q99626 313 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-208ENST00000493601 CALML3P27482 149 aa19.49■□□□□ 0.71
PTPRU-208ENST00000493601 DUSP28Q4G0W2 176 aa19.49■□□□□ 0.71
PTPRU-208ENST00000493601 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPRU-208ENST00000493601 ZKSCAN3Q9BRR0 538 aa19.49■□□□□ 0.71
PTPRU-208ENST00000493601 DSCC1Q9BVC3 393 aa19.49■□□□□ 0.71
PTPRU-208ENST00000493601 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
PTPRU-208ENST00000493601 TTYH1Q9H313 450 aaPredicted RBP19.49■□□□□ 0.71
PTPRU-208ENST00000493601 CUL9Q8IWT3 2517 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-208ENST00000493601 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-208ENST00000493601 KDM4AO75164 1064 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 CSF2RAP15509 400 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 PTGS1P23219 599 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 IMMTQ16891 758 aaKnown RBP19.48■□□□□ 0.71
PTPRU-208ENST00000493601 PSRC1Q6PGN9 363 aaPredicted RBP19.48■□□□□ 0.71
PTPRU-208ENST00000493601 PNMA1Q8ND90 353 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 WDR11Q9BZH6 1224 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 KAT14Q9H8E8 782 aa19.48■□□□□ 0.71
PTPRU-208ENST00000493601 MYH6P13533 1939 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 PRUNE2Q8WUY3 3088 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 DNAJB2P25686 324 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 CPT1AP50416 773 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 RPS6P62753 249 aaKnown RBP19.47■□□□□ 0.71
PTPRU-208ENST00000493601 PDE4DQ08499 809 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.47■□□□□ 0.71
PTPRU-208ENST00000493601 HIPK3Q9H422 1215 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 RAD50Q92878 1312 aa19.47■□□□□ 0.71
PTPRU-208ENST00000493601 RBM47A0AV96 593 aaKnown RBP19.46■□□□□ 0.71
PTPRU-208ENST00000493601 B4DLN1 442 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 B4E1Z4 1266 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 CYP2C18P33260 490 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 MRPL12P52815 198 aaKnown RBP19.46■□□□□ 0.71
PTPRU-208ENST00000493601 USH1GQ495M9 461 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 TMEM240Q5SV17 173 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 TMEM63BQ5T3F8 832 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 MAFAQ8NHW3 353 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-208ENST00000493601 ZSCAN10Q96SZ4 725 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-208ENST00000493601 CNNM2Q9H8M5 875 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 POLR3EQ9NVU0 708 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 GRIN2DO15399 1336 aa19.46■□□□□ 0.71
PTPRU-208ENST00000493601 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPRU-208ENST00000493601 FOSL2P15408 326 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 EDNRBP24530 442 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 PSMC6P62333 389 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 PPP2R5BQ15173 497 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 CDC37Q16543 378 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-208ENST00000493601 ASPRV1Q53RT3 343 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 BRDTQ58F21 947 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-208ENST00000493601 C16orf59Q7L2K0 433 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 RGS22Q8NE09 1264 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 SCFD2Q8WU76 684 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 MYLIPQ8WY64 445 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 ANKS1AQ92625 1134 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 KRT23Q9C075 422 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 MAF1Q9H063 256 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 IL23AQ9NPF7 189 aa19.45■□□□□ 0.7
PTPRU-208ENST00000493601 B4GALT4O60513 344 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 RASIP1Q5U651 963 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 ENAHQ8N8S7 591 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-208ENST00000493601 OR6J1Q8NGC5 347 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 UBAC1Q9BSL1 405 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 NOC4LQ9BVI4 516 aaKnown RBP19.44■□□□□ 0.7
PTPRU-208ENST00000493601 UBA5Q9GZZ9 404 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 TRPV6Q9H1D0 765 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 MTIF3Q9H2K0 278 aaKnown RBP19.44■□□□□ 0.7
PTPRU-208ENST00000493601 TNKSO95271 1327 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 ABCB11O95342 1321 aa19.44■□□□□ 0.7
PTPRU-208ENST00000493601 ACRP10323 421 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 PURAQ00577 322 aaKnown RBP19.43■□□□□ 0.7
PTPRU-208ENST00000493601 ZNF365Q70YC5 407 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 TIFAQ96CG3 184 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 ALDH8A1Q9H2A2 487 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-208ENST00000493601 CPVLQ9H3G5 476 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-208ENST00000493601 ZSWIM5Q9P217 1185 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 SCN10AQ9Y5Y9 1956 aa19.43■□□□□ 0.7
PTPRU-208ENST00000493601 MYL3P08590 195 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 PARP1P09874 1014 aaKnown RBP19.42■□□□□ 0.7
PTPRU-208ENST00000493601 ADGRF4Q8IZF3 695 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 HERVK_113Q902F9 699 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 MTG1Q9BT17 334 aaPredicted RBP19.42■□□□□ 0.7
PTPRU-208ENST00000493601 ZNF576Q9H609 170 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 CHD9Q3L8U1 2897 aa19.42■□□□□ 0.7
PTPRU-208ENST00000493601 DHX16O60231 1041 aaKnown RBP19.41■□□□□ 0.7
PTPRU-208ENST00000493601 KPNA6O60684 536 aa19.41■□□□□ 0.7
PTPRU-208ENST00000493601 SUPT20HL2P0C7V6 817 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms