RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 DUSP28Q4G0W2 176 aa25.4■■□□□ 1.66
PFDN4-205ENST00000493356 MTMR7Q9Y216 660 aa25.4■■□□□ 1.66
PFDN4-205ENST00000493356 MYOGP15173 224 aa25.39■■□□□ 1.66
PFDN4-205ENST00000493356 PPP2R2DQ66LE6 453 aa25.39■■□□□ 1.66
PFDN4-205ENST00000493356 OTUD7AQ8TE49 926 aaPredicted RBP25.39■■□□□ 1.66
PFDN4-205ENST00000493356 PCDHA11Q9Y5I1 949 aa25.39■■□□□ 1.66
PFDN4-205ENST00000493356 NOVP48745 357 aa25.38■■□□□ 1.65
PFDN4-205ENST00000493356 BAATQ14032 418 aaPredicted RBP25.38■■□□□ 1.65
PFDN4-205ENST00000493356 CCDC96Q2M329 555 aa25.38■■□□□ 1.65
PFDN4-205ENST00000493356 UHRF1Q96T88 793 aaPredicted RBP25.38■■□□□ 1.65
PFDN4-205ENST00000493356 RANBP17Q9H2T7 1088 aaKnown RBP25.38■■□□□ 1.65
PFDN4-205ENST00000493356 TRMT13Q9NUP7 481 aaKnown RBP25.38■■□□□ 1.65
PFDN4-205ENST00000493356 ZBBXA8MT70 800 aa25.37■■□□□ 1.65
PFDN4-205ENST00000493356 ALDH5A1P51649 535 aaPredicted RBP25.37■■□□□ 1.65
PFDN4-205ENST00000493356 DCAF4Q8WV16 495 aa25.37■■□□□ 1.65
PFDN4-205ENST00000493356 WDR11Q9BZH6 1224 aa25.37■■□□□ 1.65
PFDN4-205ENST00000493356 POLR3EQ9NVU0 708 aa25.37■■□□□ 1.65
PFDN4-205ENST00000493356 ADD3Q9UEY8 706 aaKnown RBP25.37■■□□□ 1.65
PFDN4-205ENST00000493356 SCN5AQ14524 2016 aa25.37■■□□□ 1.65
PFDN4-205ENST00000493356 XIRP2A4UGR9 3374 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 NFIBO00712 420 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 RANBP6O60518 1105 aaKnown RBP25.36■■□□□ 1.65
PFDN4-205ENST00000493356 SUPT20HL2P0C7V6 817 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 CYP2C9P11712 490 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 ATP2A2P16615 1042 aaKnown RBP25.36■■□□□ 1.65
PFDN4-205ENST00000493356 SLC16A2P36021 539 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 PURAQ00577 322 aaKnown RBP25.36■■□□□ 1.65
PFDN4-205ENST00000493356 TTBK2Q6IQ55 1244 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 ANAPC4Q9UJX5 808 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 TNKSO95271 1327 aa25.36■■□□□ 1.65
PFDN4-205ENST00000493356 SCN10AQ9Y5Y9 1956 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 LOC102724159A0A0B4J2E5 919 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 PFKMP08237 780 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 TTLL4Q14679 1199 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 PWP2Q15269 919 aaKnown RBP25.35■■□□□ 1.65
PFDN4-205ENST00000493356 BTNL9Q6UXG8 535 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 IL27Q8NEV9 243 aa25.35■■□□□ 1.65
PFDN4-205ENST00000493356 RBM47A0AV96 593 aaKnown RBP25.34■■□□□ 1.65
PFDN4-205ENST00000493356 ORC4O43929 436 aa25.34■■□□□ 1.65
PFDN4-205ENST00000493356 CPT1AP50416 773 aa25.34■■□□□ 1.65
PFDN4-205ENST00000493356 SYDE2Q5VT97 1194 aa25.34■■□□□ 1.65
PFDN4-205ENST00000493356 TSPYL2Q9H2G4 693 aaPredicted RBP25.34■■□□□ 1.65
PFDN4-205ENST00000493356 PRRC2BQ5JSZ5 2229 aaKnown RBP25.33■■□□□ 1.65
PFDN4-205ENST00000493356 TCF20Q9UGU0 1960 aaKnown RBP25.33■■□□□ 1.65
PFDN4-205ENST00000493356 MYL3P08590 195 aa25.33■■□□□ 1.65
PFDN4-205ENST00000493356 MX1P20591 662 aa25.33■■□□□ 1.65
PFDN4-205ENST00000493356 VPS53Q5VIR6 699 aa25.33■■□□□ 1.65
PFDN4-205ENST00000493356 DEFB128Q7Z7B8 93 aa25.33■■□□□ 1.65
PFDN4-205ENST00000493356 MICALL1Q8N3F8 863 aa25.33■■□□□ 1.65
PFDN4-205ENST00000493356 PTPDC1A2A3K4 754 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 FGRP09769 529 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 SLC30A10Q6XR72 485 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 OR6J1Q8NGC5 347 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 MTG1Q9BT17 334 aaPredicted RBP25.32■■□□□ 1.64
PFDN4-205ENST00000493356 RAPGEFL1Q9UHV5 662 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 TANC1Q9C0D5 1861 aa25.32■■□□□ 1.64
PFDN4-205ENST00000493356 CA3P07451 260 aa25.31■■□□□ 1.64
PFDN4-205ENST00000493356 TMEM67Q5HYA8 995 aa25.31■■□□□ 1.64
PFDN4-205ENST00000493356 CLEC4DQ8WXI8 215 aa25.31■■□□□ 1.64
PFDN4-205ENST00000493356 GPHNQ9NQX3 736 aaPredicted RBP25.31■■□□□ 1.64
PFDN4-205ENST00000493356 PCDHB15Q9Y5E8 787 aa25.31■■□□□ 1.64
PFDN4-205ENST00000493356 FRMPD2Q68DX3 1309 aaPredicted RBP25.31■■□□□ 1.64
PFDN4-205ENST00000493356 TOP1P11387 765 aaKnown RBP25.3■■□□□ 1.64
PFDN4-205ENST00000493356 BMP1P13497 986 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 CALML3P27482 149 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 TFF2Q03403 129 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 NBPF20Q3BBV1 942 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 FAM47CQ5HY64 1035 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 NECAB3Q96P71 396 aaPredicted RBP25.3■■□□□ 1.64
PFDN4-205ENST00000493356 TMEM47Q9BQJ4 181 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 GPCPD1Q9NPB8 672 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 SALL3Q9BXA9 1300 aa25.3■■□□□ 1.64
PFDN4-205ENST00000493356 RFXAPO00287 272 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 ACTN1P12814 892 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 POU3F3P20264 500 aaPredicted RBP25.29■■□□□ 1.64
PFDN4-205ENST00000493356 RFC2P35250 354 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 PPP2R5BQ15173 497 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 ALX1Q15699 326 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 RNF207Q6ZRF8 634 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 PPP1R13LQ8WUF5 828 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 TOMM22Q9NS69 142 aa25.29■■□□□ 1.64
PFDN4-205ENST00000493356 NKRFO15226 690 aaKnown RBP eCLIP25.28■■□□□ 1.64
PFDN4-205ENST00000493356 EDNRBP24530 442 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 PDE4DQ08499 809 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 BRDTQ58F21 947 aaPredicted RBP25.28■■□□□ 1.64
PFDN4-205ENST00000493356 RRP12Q5JTH9 1297 aaKnown RBP25.28■■□□□ 1.64
PFDN4-205ENST00000493356 NFRKBQ6P4R8 1299 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 SLC9A7Q96T83 725 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 MTCH2Q9Y6C9 303 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 RAD50Q92878 1312 aa25.28■■□□□ 1.64
PFDN4-205ENST00000493356 TET1Q8NFU7 2136 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 A6NJR5 290 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 PITPNM1O00562 1244 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 IQCF3P0C7M6 154 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 PDHBP11177 359 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 RPS6P62753 249 aaKnown RBP25.27■■□□□ 1.64
PFDN4-205ENST00000493356 SCFD2Q8WU76 684 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 CERS4Q9HA82 394 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 TCP11L1Q9NUJ3 509 aa25.27■■□□□ 1.64
PFDN4-205ENST00000493356 PNMA2Q9UL42 364 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms