RNA–Protein interactions for RNA: ENST00000493283.5

PTCD2-205, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-205ENST00000493283 BAATQ14032 418 aaPredicted RBP16.58■□□□□ 0.24
PTCD2-205ENST00000493283 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
PTCD2-205ENST00000493283 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
PTCD2-205ENST00000493283 ARRDC4Q8NCT1 418 aa16.58■□□□□ 0.24
PTCD2-205ENST00000493283 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.24
PTCD2-205ENST00000493283 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
PTCD2-205ENST00000493283 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
PTCD2-205ENST00000493283 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
PTCD2-205ENST00000493283 FAM184BQ9ULE4 1060 aa16.58■□□□□ 0.24
PTCD2-205ENST00000493283 KIAA0100Q14667 2235 aaKnown RBP16.57■□□□□ 0.24
PTCD2-205ENST00000493283 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
PTCD2-205ENST00000493283 CPLX1O14810 134 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 RARBP10826 455 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 CALML3P27482 149 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 HSD17B4P51659 736 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 MCTP2Q6DN12 878 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 ARMCX2Q7L311 632 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 SRBD1Q8N5C6 995 aaKnown RBP16.57■□□□□ 0.24
PTCD2-205ENST00000493283 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 UPF3BQ9BZI7 483 aaKnown RBP16.57■□□□□ 0.24
PTCD2-205ENST00000493283 SPC25Q9HBM1 224 aa16.57■□□□□ 0.24
PTCD2-205ENST00000493283 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.57■□□□□ 0.24
PTCD2-205ENST00000493283 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 MYCP01106 439 aaPredicted RBP16.56■□□□□ 0.24
PTCD2-205ENST00000493283 RXRAP19793 462 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 ALDH5A1P51649 535 aaPredicted RBP16.56■□□□□ 0.24
PTCD2-205ENST00000493283 PDE4DQ08499 809 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
PTCD2-205ENST00000493283 POTEFA5A3E0 1075 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 PIK3CDO00329 1044 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 CFBP00751 764 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 CPA1P15085 419 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
PTCD2-205ENST00000493283 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
PTCD2-205ENST00000493283 CNTN2Q02246 1040 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 MLLT1Q03111 559 aaPredicted RBP16.55■□□□□ 0.24
PTCD2-205ENST00000493283 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
PTCD2-205ENST00000493283 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
PTCD2-205ENST00000493283 CNTNAP5Q8WYK1 1306 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 SOWAHBA6NEL2 793 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 STAM2O75886 525 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
PTCD2-205ENST00000493283 IFNAR1P17181 557 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 CCND3P30281 292 aaPredicted RBP16.54■□□□□ 0.24
PTCD2-205ENST00000493283 TRIM32Q13049 653 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 TOB2Q14106 344 aaPredicted RBP16.54■□□□□ 0.24
PTCD2-205ENST00000493283 IQSEC1Q6DN90 963 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 XRRA1Q6P2D8 792 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 SLC30A10Q6XR72 485 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 RMDN3Q96TC7 470 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
PTCD2-205ENST00000493283 Q9Y3F1 56 aa16.54■□□□□ 0.24
PTCD2-205ENST00000493283 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 PPP1R11O60927 126 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 SNAI1O95863 264 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 EDNRBP24530 442 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 NEK4P51957 841 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 STXBP2Q15833 593 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 ARHGEF16Q5VV41 709 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 RNF180Q86T96 592 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 SYTL5Q8TDW5 730 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 FGD4Q96M96 766 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-205ENST00000493283 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
PTCD2-205ENST00000493283 DNM1LO00429 736 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.24
PTCD2-205ENST00000493283 FOSP01100 380 aaPredicted RBP16.52■□□□□ 0.24
PTCD2-205ENST00000493283 FUT2Q10981 343 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 SLC35G1Q2M3R5 365 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 BRDTQ58F21 947 aaPredicted RBP16.52■□□□□ 0.24
PTCD2-205ENST00000493283 LHX8Q68G74 356 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 SCFD2Q8WU76 684 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 XPNPEP3Q9NQH7 507 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
PTCD2-205ENST00000493283 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.24
PTCD2-205ENST00000493283 BAZ2BQ9UIF8 2168 aaKnown RBP16.52■□□□□ 0.24
PTCD2-205ENST00000493283 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.23
PTCD2-205ENST00000493283 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
PTCD2-205ENST00000493283 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
PTCD2-205ENST00000493283 SCG2P13521 617 aa16.51■□□□□ 0.23
PTCD2-205ENST00000493283 XBP1P17861 261 aa16.51■□□□□ 0.23
PTCD2-205ENST00000493283 GNA11P29992 359 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms