RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 TPH2Q8IWU9 490 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 NSUN7Q8NE18 718 aaKnown RBP7.03□□□□□ -1.28
NF1-215ENST00000493220 TBC1D5Q92609 795 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 TEX13BQ9BXU2 312 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 ANO3Q9BYT9 981 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 TRIM6Q9C030 488 aaPredicted RBP7.03□□□□□ -1.28
NF1-215ENST00000493220 KLRG2A4D1S0 409 aaPredicted RBP7.03□□□□□ -1.28
NF1-215ENST00000493220 PPATQ06203 517 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 CCDC173Q0VFZ6 552 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 NEDD9Q14511 834 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 CCDC155Q8N6L0 562 aa7.03□□□□□ -1.28
NF1-215ENST00000493220 ARFGEF2Q9Y6D5 1785 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 PALM3A6NDB9 673 aaPredicted RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 TBC1D12O60347 775 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 BMS1Q14692 1282 aaKnown RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 NOM1Q5C9Z4 860 aaKnown RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 MYSM1Q5VVJ2 828 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 TCERG1LQ5VWI1 586 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 DEPTORQ8TB45 409 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 RIOK1Q9BRS2 568 aaKnown RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 KCNH3Q9ULD8 1083 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 CACNA1FO60840 1977 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 EPB41P11171 864 aaKnown RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 ZNF543Q08ER8 600 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 RNF214Q8ND24 703 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 OPTNQ96CV9 577 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 EPB41L4AQ9HCS5 686 aaPredicted RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 RIC8AQ9NPQ8 531 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 PCDHA6Q9UN73 950 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 PCDHA8Q9Y5H6 950 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 NR1I2O75469 434 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 MAPK4P31152 587 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 PPIL2Q13356 520 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 MTMR14Q8NCE2 650 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 GOLGA5Q8TBA6 731 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 POLGP54098 1239 aaPredicted RBP7.02□□□□□ -1.29
NF1-215ENST00000493220 BACE1P56817 501 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
NF1-215ENST00000493220 MYL3P08590 195 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 CA8P35219 290 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 SLFNL1Q499Z3 407 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 NBPF11Q86T75 865 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 PIAS4Q8N2W9 510 aaPredicted RBP7.01□□□□□ -1.29
NF1-215ENST00000493220 FBXO18Q8NFZ0 1043 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 TBCKQ8TEA7 893 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 BARHL2Q9NY43 387 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 SYCE3A1L190 88 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 PPP6R2O75170 966 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 STAM2O75886 525 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 RGS2P41220 211 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 XKR9Q5GH70 373 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 XRRA1Q6P2D8 792 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 NEK9Q8TD19 979 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 RMDN3Q96TC7 470 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 NMT2O60551 498 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 PLEKHA8P1O95397 391 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 NDUFB10O96000 172 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 SFNP31947 248 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 FAM102BQ5T8I3 360 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 APOBEC3HQ6NTF7 200 aaKnown RBP7.01□□□□□ -1.29
NF1-215ENST00000493220 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 METTL13Q8N6R0 699 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 PROCA1Q8NCQ7 364 aaPredicted RBP7.01□□□□□ -1.29
NF1-215ENST00000493220 NUDT12Q9BQG2 462 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 MROH8Q9H579 483 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 GDPD2Q9HCC8 539 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.293e-8■■■■■ 74.5
NF1-215ENST00000493220 ANKRD62A6NC57 917 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 TECP42680 631 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 DMP1Q13316 513 aaPredicted RBP7.01□□□□□ -1.29
NF1-215ENST00000493220 TAF3Q5VWG9 929 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 ERO1AQ96HE7 468 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 FNBP1Q96RU3 617 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
NF1-215ENST00000493220 MYO6Q9UM54 1294 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 PCDHB13Q9Y5F0 798 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.01□□□□□ -1.295e-6■■■■□ 23.6
NF1-215ENST00000493220 MTMR1Q13613 665 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 QRICH1Q2TAL8 776 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 TEX35Q5T0J7 233 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 TCP11Q8WWU5 503 aa7.01□□□□□ -1.29
NF1-215ENST00000493220 ADM5C9JUS6 153 aa7□□□□□ -1.29
NF1-215ENST00000493220 SLC26A4O43511 780 aa7□□□□□ -1.29
NF1-215ENST00000493220 KRT76Q01546 638 aa7□□□□□ -1.29
NF1-215ENST00000493220 UVSSAQ2YD98 709 aa7□□□□□ -1.29
NF1-215ENST00000493220 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 MAP1SQ66K74 1059 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 ARMCX6Q7L4S7 300 aa7□□□□□ -1.29
NF1-215ENST00000493220 GMCL1Q96IK5 515 aa7□□□□□ -1.29
NF1-215ENST00000493220 NACC1Q96RE7 527 aa7□□□□□ -1.29
NF1-215ENST00000493220 NUP88Q99567 741 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 GLIS2Q9BZE0 524 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 RTEL1Q9NZ71 1219 aa7□□□□□ -1.29
NF1-215ENST00000493220 SEPT9Q9UHD8 586 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 ZNF541Q9H0D2 1346 aa7□□□□□ -1.29
NF1-215ENST00000493220 GAP43P17677 238 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms