RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 PPM1EQ8WY54 764 aa26.55■■□□□ 1.84
HMG20B-214ENST00000493191 GAS2L1Q99501 681 aaPredicted RBP26.55■■□□□ 1.84
HMG20B-214ENST00000493191 SEZ6LQ9BYH1 1024 aa26.55■■□□□ 1.84
HMG20B-214ENST00000493191 ADD3Q9UEY8 706 aaKnown RBP26.55■■□□□ 1.84
HMG20B-214ENST00000493191 MSRAQ9UJ68 235 aa26.55■■□□□ 1.84
HMG20B-214ENST00000493191 CHD9Q3L8U1 2897 aa26.55■■□□□ 1.84
HMG20B-214ENST00000493191 RRP1P56182 461 aaKnown RBP26.54■■□□□ 1.84
HMG20B-214ENST00000493191 HAND2P61296 217 aa26.54■■□□□ 1.84
HMG20B-214ENST00000493191 DUSP28Q4G0W2 176 aa26.54■■□□□ 1.84
HMG20B-214ENST00000493191 WDR11Q9BZH6 1224 aa26.54■■□□□ 1.84
HMG20B-214ENST00000493191 PRDM6Q9NQX0 595 aa26.54■■□□□ 1.84
HMG20B-214ENST00000493191 TCP11L1Q9NUJ3 509 aa26.54■■□□□ 1.84
HMG20B-214ENST00000493191 HSPD1P10809 573 aaKnown RBP26.53■■□□□ 1.84
HMG20B-214ENST00000493191 RAB30Q15771 203 aa26.53■■□□□ 1.84
HMG20B-214ENST00000493191 SYMPKQ92797 1274 aaKnown RBP26.53■■□□□ 1.84
HMG20B-214ENST00000493191 CRBNQ96SW2 442 aa26.53■■□□□ 1.84
HMG20B-214ENST00000493191 WNT8AQ9H1J5 351 aa26.53■■□□□ 1.84
HMG20B-214ENST00000493191 MTIF3Q9H2K0 278 aaKnown RBP26.53■■□□□ 1.84
HMG20B-214ENST00000493191 CALML3P27482 149 aa26.52■■□□□ 1.84
HMG20B-214ENST00000493191 SLC30A10Q6XR72 485 aa26.52■■□□□ 1.84
HMG20B-214ENST00000493191 ZNF589Q86UQ0 364 aaPredicted RBP26.52■■□□□ 1.84
HMG20B-214ENST00000493191 CLEC4DQ8WXI8 215 aa26.52■■□□□ 1.84
HMG20B-214ENST00000493191 GBF1Q92538 1859 aa26.52■■□□□ 1.84
HMG20B-214ENST00000493191 ALDH8A1Q9H2A2 487 aaPredicted RBP26.52■■□□□ 1.84
HMG20B-214ENST00000493191 NKX2-4Q9H2Z4 354 aa26.52■■□□□ 1.84
HMG20B-214ENST00000493191 PDHBP11177 359 aa26.51■■□□□ 1.83
HMG20B-214ENST00000493191 NMIQ13287 307 aaPredicted RBP26.51■■□□□ 1.83
HMG20B-214ENST00000493191 SCLYQ96I15 445 aa26.51■■□□□ 1.83
HMG20B-214ENST00000493191 TRMT13Q9NUP7 481 aaKnown RBP26.51■■□□□ 1.83
HMG20B-214ENST00000493191 YBX2Q9Y2T7 364 aaKnown RBP26.51■■□□□ 1.83
HMG20B-214ENST00000493191 MYL3P08590 195 aa26.5■■□□□ 1.83
HMG20B-214ENST00000493191 RNF207Q6ZRF8 634 aa26.5■■□□□ 1.83
HMG20B-214ENST00000493191 POLR3EQ9NVU0 708 aa26.5■■□□□ 1.83
HMG20B-214ENST00000493191 RBM47A0AV96 593 aaKnown RBP26.49■■□□□ 1.83
HMG20B-214ENST00000493191 PURAQ00577 322 aaKnown RBP26.49■■□□□ 1.83
HMG20B-214ENST00000493191 ZNF543Q08ER8 600 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 ADGRE1Q14246 886 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 TJAP1Q5JTD0 557 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 MFSD6Q6ZSS7 791 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 RPUSD2Q8IZ73 545 aaKnown RBP26.49■■□□□ 1.83
HMG20B-214ENST00000493191 OR6J1Q8NGC5 347 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 SLC28A3Q9HAS3 691 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 CHD7Q9P2D1 2997 aa26.49■■□□□ 1.83
HMG20B-214ENST00000493191 LOC102724159A0A0B4J2E5 919 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 TRIM6-TRIM34B2RNG4 842 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 CYP2C9P11712 490 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 IGFBP4P22692 258 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 CPT1AP50416 773 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 RABGGTBP53611 331 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 PDE4DQ08499 809 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 HDAC1Q13547 482 aaPredicted RBP26.48■■□□□ 1.83
HMG20B-214ENST00000493191 PWP2Q15269 919 aaKnown RBP26.48■■□□□ 1.83
HMG20B-214ENST00000493191 CCDC85BQ15834 202 aaPredicted RBP26.48■■□□□ 1.83
HMG20B-214ENST00000493191 AKNAD1Q5T1N1 836 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 VWCEQ96DN2 955 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 TTC14Q96N46 770 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 SLC4A7Q9Y6M7 1214 aa26.48■■□□□ 1.83
HMG20B-214ENST00000493191 TNKSO95271 1327 aa26.47■■□□□ 1.83
HMG20B-214ENST00000493191 ZMYM6O95789 1325 aa26.47■■□□□ 1.83
HMG20B-214ENST00000493191 CCDC171Q6TFL3 1326 aa26.47■■□□□ 1.83
HMG20B-214ENST00000493191 RPS6P62753 249 aaKnown RBP26.47■■□□□ 1.83
HMG20B-214ENST00000493191 TBC1D10CQ8IV04 446 aa26.47■■□□□ 1.83
HMG20B-214ENST00000493191 PPP1R13LQ8WUF5 828 aa26.47■■□□□ 1.83
HMG20B-214ENST00000493191 GPHNQ9NQX3 736 aaPredicted RBP26.47■■□□□ 1.83
HMG20B-214ENST00000493191 MUC3AQ02505 3323 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 ZBBXA8MT70 800 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 SUPT20HL2P0C7V6 817 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 RILPL2Q969X0 211 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 ZKSCAN3Q9BRR0 538 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 MTG1Q9BT17 334 aaPredicted RBP26.46■■□□□ 1.83
HMG20B-214ENST00000493191 LNPKQ9C0E8 428 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 PNMA2Q9UL42 364 aa26.46■■□□□ 1.83
HMG20B-214ENST00000493191 GOLGA8HP0CJ92 632 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 SNHG28P0DPA3 235 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 MYOGP15173 224 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 PPP2R5BQ15173 497 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 NBPF20Q3BBV1 942 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 FAM47CQ5HY64 1035 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 TICAM2Q86XR7 235 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 COPS5Q92905 334 aa26.45■■□□□ 1.82
HMG20B-214ENST00000493191 SCN5AQ14524 2016 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 SCN10AQ9Y5Y9 1956 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 TTLL4Q14679 1199 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 USH1GQ495M9 461 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 DEFB128Q7Z7B8 93 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 MPHOSPH6Q99547 160 aaKnown RBP26.44■■□□□ 1.82
HMG20B-214ENST00000493191 CPVLQ9H3G5 476 aa26.44■■□□□ 1.82
HMG20B-214ENST00000493191 NEDD4P46934 1319 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 WDR19Q8NEZ3 1342 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 PCP11498 1178 aaKnown RBP26.43■■□□□ 1.82
HMG20B-214ENST00000493191 EDNRBP24530 442 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 BRDTQ58F21 947 aaPredicted RBP26.43■■□□□ 1.82
HMG20B-214ENST00000493191 DNERQ8NFT8 737 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 SCFD2Q8WU76 684 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 UBA5Q9GZZ9 404 aa26.43■■□□□ 1.82
HMG20B-214ENST00000493191 NKRFO15226 690 aaKnown RBP eCLIP26.42■■□□□ 1.82
HMG20B-214ENST00000493191 TXNP10599 105 aaKnown RBP26.42■■□□□ 1.82
HMG20B-214ENST00000493191 ATP2A2P16615 1042 aaKnown RBP26.42■■□□□ 1.82
HMG20B-214ENST00000493191 PPP2R2DQ66LE6 453 aa26.42■■□□□ 1.82
HMG20B-214ENST00000493191 ESR2Q92731 530 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms