RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 LSG1Q9H089 658 aaKnown RBP14.91□□□□□ -0.02
TRIM11-204ENST00000493030 NBPF3Q9H094 633 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 NUB1Q9Y5A7 615 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 RNF8O76064 485 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 CIAO1O76071 339 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 POLR2BP30876 1174 aaKnown RBP14.91□□□□□ -0.02
TRIM11-204ENST00000493030 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 GPATCH4Q5T3I0 446 aaKnown RBP14.91□□□□□ -0.02
TRIM11-204ENST00000493030 ANTXR1Q9H6X2 564 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 ZNF277Q9NRM2 450 aaPredicted RBP14.91□□□□□ -0.02
TRIM11-204ENST00000493030 PNMA2Q9UL42 364 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 AKT3Q9Y243 479 aa14.91□□□□□ -0.02
TRIM11-204ENST00000493030 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 MYL7Q01449 175 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 NXNQ6DKJ4 435 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 PDZD4Q76G19 769 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 LMNTD2Q8IXW0 634 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 ZNF148Q9UQR1 794 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 BFSP1Q12934 665 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 ASPRV1Q53RT3 343 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 PRPF31Q8WWY3 499 aaKnown RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 TLR3O15455 904 aaKnown RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 PLCB4Q15147 1175 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 DIXDC1Q155Q3 683 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 AOC3Q16853 763 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 APOA5Q6Q788 366 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 PPP4R1Q8TF05 950 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 PCDHA4Q9UN74 947 aa14.9□□□□□ -0.02
TRIM11-204ENST00000493030 CASQ2O14958 399 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 TROVE2P10155 538 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 LARP4BQ92615 738 aaKnown RBP14.9□□□□□ -0.02
TRIM11-204ENST00000493030 THAP12O43422 761 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 PRKAB2O43741 272 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 CYP21A2P08686 494 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 KIF11P52732 1056 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 RBM6P78332 1123 aaKnown RBP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 TFDP1Q14186 410 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 SCYL1Q96KG9 808 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 MIS12Q9H081 205 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 GCC2Q8IWJ2 1684 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 INO80B-WBP1J3KQ70 363 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 INO80BQ9C086 356 aaPredicted RBP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 CACYBPQ9HB71 228 aaKnown RBP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 PTK2Q05397 1052 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 CCDC170Q8IYT3 715 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 SLC7A3Q8WY07 619 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 MYO5CQ9NQX4 1742 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 A0A1B0GUA9 196 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 NR2F2P24468 414 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 COPB1P53618 953 aaKnown RBP14.89□□□□□ -0.03
TRIM11-204ENST00000493030 LRRC41Q15345 812 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 ATP6V0A1Q93050 837 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 VCXQ9H320 206 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 STK38LQ9Y2H1 464 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 PCDHA5Q9Y5H7 936 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 CHD1O14646 1710 aa14.89□□□□□ -0.03
TRIM11-204ENST00000493030 RAD17O75943 681 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 RASSF7Q02833 373 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 EHHADHQ08426 723 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 TUBGCP2Q9BSJ2 902 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 HAUS4Q9H6D7 363 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 H7C0C1 242 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 ARHGAP25P42331 645 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 ATP5OP48047 213 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 PIGSQ96S52 555 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 TTC36A6NLP5 189 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 GSTA1P08263 222 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 GSTA2P09210 222 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 ATF2P15336 505 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 CCNA1P78396 465 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 MESDQ14696 234 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 SMYD4Q8IYR2 804 aaPredicted RBP14.88□□□□□ -0.03
TRIM11-204ENST00000493030 EPN1Q9Y6I3 576 aaPredicted RBP14.88□□□□□ -0.03
TRIM11-204ENST00000493030 RGS12O14924 1447 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 A6NJR5 290 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 SH2D4BQ5SQS7 431 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 ABI1Q8IZP0 508 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 SKA2Q8WVK7 121 aaPredicted RBP14.88□□□□□ -0.03
TRIM11-204ENST00000493030 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 PPFIA4O75335 1185 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
TRIM11-204ENST00000493030 MFAP3P55082 362 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 TSNAXIP1Q2TAA8 658 aa14.88□□□□□ -0.03
TRIM11-204ENST00000493030 CC2D2BQ6DHV5 1058 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms