RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 FAM178BQ8IXR5 827 aa18.15■□□□□ 0.5
EPHB4-209ENST00000492878 CYP39A1Q9NYL5 469 aa18.15■□□□□ 0.5
EPHB4-209ENST00000492878 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
EPHB4-209ENST00000492878 PLA2G6O60733 806 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 TTLL1O95922 423 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 MRE11P49959 708 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 LEXMQ3ZCV2 418 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 LRRC47Q8N1G4 583 aaKnown RBP18.14■□□□□ 0.49
EPHB4-209ENST00000492878 TRERF1Q96PN7 1200 aa18.14■□□□□ 0.49
EPHB4-209ENST00000492878 LCHNA4D1U4 455 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 STAT2P52630 851 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 C20orf194Q5TEA3 1177 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 NFRKBQ6P4R8 1299 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 EEPD1Q7L9B9 569 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 GJD3Q8N144 294 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 STAG1Q8WVM7 1258 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 GMCL1Q96IK5 515 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 UBE2ZQ9H832 354 aaPredicted RBP18.13■□□□□ 0.49
EPHB4-209ENST00000492878 TRIOO75962 3097 aa18.13■□□□□ 0.49
EPHB4-209ENST00000492878 CPT1AP50416 773 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
EPHB4-209ENST00000492878 NBPF20Q3BBV1 942 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 MUM1L1Q5H9M0 696 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 GDPD5Q8WTR4 605 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
EPHB4-209ENST00000492878 KCNH6Q9H252 994 aa18.12■□□□□ 0.49
EPHB4-209ENST00000492878 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
EPHB4-209ENST00000492878 ZNF318Q5VUA4 2279 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 ALAS1P13196 640 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 WDR5P61964 334 aaKnown RBP18.11■□□□□ 0.49
EPHB4-209ENST00000492878 NHLH1Q02575 133 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 GPNMBQ14956 572 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
EPHB4-209ENST00000492878 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
EPHB4-209ENST00000492878 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-209ENST00000492878 PURBQ96QR8 312 aaKnown RBP18.11■□□□□ 0.49
EPHB4-209ENST00000492878 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-209ENST00000492878 MINDY4BA8MYZ0 360 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 PRDM1O75626 825 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 MYL3P08590 195 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 ALADP13716 330 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 ERVK-21P61565 698 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 BFSP2Q13515 415 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 LRRFIP1Q32MZ4 808 aaKnown RBP18.1■□□□□ 0.49
EPHB4-209ENST00000492878 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
EPHB4-209ENST00000492878 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 CTAGE1Q96RT6 745 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 WDR11Q9BZH6 1224 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
EPHB4-209ENST00000492878 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 ZNF287Q9HBT7 754 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
EPHB4-209ENST00000492878 SIP14410 1827 aa18.09■□□□□ 0.49
EPHB4-209ENST00000492878 A6NJR5 290 aa18.09■□□□□ 0.49
EPHB4-209ENST00000492878 RAB11FIP3O75154 756 aa18.09■□□□□ 0.49
EPHB4-209ENST00000492878 POTEB3A0JP26 581 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 KPNA6O60684 536 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 KCNJ6P48051 423 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 POTEBQ6S5H4 581 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 OSBP2Q969R2 916 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 SNX27Q96L92 541 aa18.08■□□□□ 0.48
EPHB4-209ENST00000492878 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.48
EPHB4-209ENST00000492878 USP34Q70CQ2 3546 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 GRXCR2A6NFK2 248 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 GJB5O95377 273 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 CXCL10P02778 98 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 IL9P15248 144 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 SLC1A4P43007 532 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 DEFB103AP81534 67 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 RBL2Q08999 1139 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 FAM47CQ5HY64 1035 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 TMCO2Q7Z6W1 182 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 CAGE1Q8TC20 777 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 NEK9Q8TD19 979 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 FBXL18Q96ME1 805 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 TGS1Q96RS0 853 aaKnown RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 GPHNQ9NQX3 736 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 ADD3Q9UEY8 706 aaKnown RBP18.07■□□□□ 0.48
EPHB4-209ENST00000492878 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
EPHB4-209ENST00000492878 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
EPHB4-209ENST00000492878 ICAM1P05362 532 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 KCNA5P22460 613 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 MCCP23508 829 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
EPHB4-209ENST00000492878 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 NSMFQ6X4W1 530 aa18.06■□□□□ 0.48
EPHB4-209ENST00000492878 OR6J1Q8NGC5 347 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms