RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 STYK1Q6J9G0 422 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 ABHD17CQ6PCB6 329 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.34
SND1-216ENST00000492840 USP53Q70EK8 1073 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 CDC37L1Q7L3B6 337 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.34
SND1-216ENST00000492840 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 PRDM6Q9NQX0 595 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 AAASQ9NRG9 546 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 PCDHA9Q9Y5H5 950 aa6.65□□□□□ -1.34
SND1-216ENST00000492840 SYNMO15061 1565 aa6.65□□□□□ -1.35
SND1-216ENST00000492840 KDM5CP41229 1560 aa6.65□□□□□ -1.35
SND1-216ENST00000492840 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 FZD9O00144 591 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 AQP7O14520 342 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
SND1-216ENST00000492840 TRIM27P14373 513 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
SND1-216ENST00000492840 MAP2K3P46734 347 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 IL2P60568 153 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 ERVK-21P61565 698 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.35
SND1-216ENST00000492840 CYP4F3Q08477 520 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 INAVAQ3KP66 663 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 EXOSC6Q5RKV6 272 aaKnown RBP6.64□□□□□ -1.35
SND1-216ENST00000492840 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
SND1-216ENST00000492840 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
SND1-216ENST00000492840 TPH2Q8IWU9 490 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 NXPE1Q8N323 547 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 SMC1BQ8NDV3 1235 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 KREMEN1Q96MU8 473 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 SLC13A1Q9BZW2 595 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 ATXN3LQ9H3M9 355 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 TCF7L1Q9HCS4 588 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 PRDM11Q9NQV5 511 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 KCNK4Q9NYG8 393 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 FHOD1Q9Y613 1164 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 ZNF518AQ6AHZ1 1483 aa6.64□□□□□ -1.35
SND1-216ENST00000492840 LILRB5O75023 590 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 FKBP9O95302 570 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 FOSP01100 380 aaPredicted RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 CT47B1P0C2W7 299 aaPredicted RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 MYBL2P10244 700 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 CD68P34810 354 aaPredicted RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 MMRN1Q13201 1228 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 PPP2R5DQ14738 602 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 SART3Q15020 963 aaKnown RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 DENND5AQ6IQ26 1287 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 SLCO4C1Q6ZQN7 724 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 FKBP9P1Q75LS8 142 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 MAP4K3Q8IVH8 894 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 ABCA6Q8N139 1617 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 SYTL5Q8TDW5 730 aaPredicted RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 USP33Q8TEY7 942 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 UBASH3BQ8TF42 649 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 DCAF4Q8WV16 495 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 ISL2Q96A47 359 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
SND1-216ENST00000492840 NEURL4Q96JN8 1562 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 FOXQ1Q9C009 403 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 MAF1Q9H063 256 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 NOL6Q9H6R4 1146 aaKnown RBP6.63□□□□□ -1.35
SND1-216ENST00000492840 SENP2Q9HC62 589 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 CYP26B1Q9NR63 512 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 PCDHB12Q9Y5F1 795 aa6.63□□□□□ -1.35
SND1-216ENST00000492840 VWDEQ8N2E2 1590 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 SNUPNO95149 360 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 MT-CO1P00395 513 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 CPP00450 1065 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 IFIT2P09913 472 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 PF4V1P10720 104 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 ECI1P42126 302 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 LSSP48449 732 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 GUCY1A3Q02108 690 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 ZRSR2Q15696 482 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 ATP13A4Q4VNC1 1196 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 HSP90AB4PQ58FF6 505 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 FIBCD1Q8N539 461 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 TRIM47Q96LD4 638 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 SARGQ9BW04 601 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 EMC7Q9NPA0 242 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 TAGLN3Q9UI15 199 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 PNMA8BQ9ULN7 279 aaPredicted RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 NSFL1CQ9UNZ2 370 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 CEP131Q9UPN4 1083 aa6.62□□□□□ -1.35
SND1-216ENST00000492840 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 GPR55Q9Y2T6 319 aaPredicted RBP6.62□□□□□ -1.35
SND1-216ENST00000492840 M0R082 166 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms