RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PFKMP08237 780 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 SNHG28P0DPA3 235 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 CSF2RAP15509 400 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 CPT1AP50416 773 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 ALDH5A1P51649 535 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-212ENST00000492407 BEX3Q00994 111 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 CCDC96Q2M329 555 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 BRDTQ58F21 947 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-212ENST00000492407 AKNAD1Q5T1N1 836 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
HDAC3-212ENST00000492407 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 NSMFQ6X4W1 530 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 MFSD6Q6ZSS7 791 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 ZNF365Q70YC5 407 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 HIPK3Q9H422 1215 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 INCENPQ9NQS7 918 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 MYH4Q9Y623 1939 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 PDHBP11177 359 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-212ENST00000492407 PTPN11Q06124 597 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-212ENST00000492407 ZNF543Q08ER8 600 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 BAATQ14032 418 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-212ENST00000492407 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 RNF207Q6ZRF8 634 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 ESR2Q92731 530 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
HDAC3-212ENST00000492407 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 WDR11Q9BZH6 1224 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-212ENST00000492407 OSBPL3Q9H4L5 887 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 PDGFCQ9NRA1 345 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 TOMM22Q9NS69 142 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 MSRAQ9UJ68 235 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 GRIN2DO15399 1336 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 CCDC171Q6TFL3 1326 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 RAD50Q92878 1312 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 UNC80Q8N2C7 3258 aa10.73□□□□□ -0.69
HDAC3-212ENST00000492407 A0A0D9SFI3 127 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 HIP1O00291 1037 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 EDNRBP24530 442 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 RFC2P35250 354 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 TTBK2Q6IQ55 1244 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 FBXO16Q8IX29 292 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-212ENST00000492407 SMC5Q8IY18 1101 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 ANKS1AQ92625 1134 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 FAM227BQ96M60 508 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-212ENST00000492407 PPP1R12CQ9BZL4 782 aa10.72□□□□□ -0.69
HDAC3-212ENST00000492407 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-212ENST00000492407 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-212ENST00000492407 PTPDC1A2A3K4 754 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 A6NJR5 290 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 NFIBO00712 420 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 ZNF213O14771 459 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 CYP2C18P33260 490 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 SLC16A2P36021 539 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 SNAP25P60880 206 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 PURAQ00577 322 aaKnown RBP10.71□□□□□ -0.69
HDAC3-212ENST00000492407 PDE4DQ08499 809 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 NMIQ13287 307 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-212ENST00000492407 RRP12Q5JTH9 1297 aaKnown RBP10.71□□□□□ -0.69
HDAC3-212ENST00000492407 NFRKBQ6P4R8 1299 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 CRBNQ96SW2 442 aa10.71□□□□□ -0.69
HDAC3-212ENST00000492407 MTG1Q9BT17 334 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-212ENST00000492407 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 B4GALT4O60513 344 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 ACRP10323 421 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 SDSP20132 328 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 RPS6P62753 249 aaKnown RBP10.7□□□□□ -0.7
HDAC3-212ENST00000492407 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 TJAP1Q5JTD0 557 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 EEPD1Q7L9B9 569 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-212ENST00000492407 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 MCF2L2Q86YR7 1114 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 ATXN2LQ8WWM7 1075 aaKnown RBP10.7□□□□□ -0.7
HDAC3-212ENST00000492407 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 SLC28A3Q9HAS3 691 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 PCDHA11Q9Y5I1 949 aa10.7□□□□□ -0.7
HDAC3-212ENST00000492407 TNKSO95271 1327 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 ABCB11O95342 1321 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 FRMPD2Q68DX3 1309 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-212ENST00000492407 ACTN1P12814 892 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 CALML3P27482 149 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 NUCB1Q02818 461 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 TTLL4Q14679 1199 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 SLC30A10Q6XR72 485 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 CHD1LQ86WJ1 897 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 OR6J1Q8NGC5 347 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 PHOSPHO2Q8TCD6 241 aa10.69□□□□□ -0.7
HDAC3-212ENST00000492407 NSUN6Q8TEA1 469 aaKnown RBP10.69□□□□□ -0.7
HDAC3-212ENST00000492407 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms