RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 IL17RBQ9NRM6 502 aa14.8□□□□□ -0.04
TREX1-204ENST00000492235 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
TREX1-204ENST00000492235 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
TREX1-204ENST00000492235 REV3LO60673 3130 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 MYL3P08590 195 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 TFF2Q03403 129 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 CTDSPL2Q05D32 466 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 BAATQ14032 418 aaPredicted RBP14.79□□□□□ -0.04
TREX1-204ENST00000492235 TTLL4Q14679 1199 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 CCDC96Q2M329 555 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
TREX1-204ENST00000492235 TNKSO95271 1327 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 RFXAPO00287 272 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 ICAM1P05362 532 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 SKIV2LQ15477 1246 aaKnown RBP14.78□□□□□ -0.04
TREX1-204ENST00000492235 ZMYM1Q5SVZ6 1142 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 MORC4Q8TE76 937 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 PPP1R13LQ8WUF5 828 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 WDR11Q9BZH6 1224 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 CERS4Q9HA82 394 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
TREX1-204ENST00000492235 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
TREX1-204ENST00000492235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
TREX1-204ENST00000492235 TTC41PQ6P2S7 1318 aa14.77□□□□□ -0.04
TREX1-204ENST00000492235 PTPDC1A2A3K4 754 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 NFIBO00712 420 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 RANBP6O60518 1105 aaKnown RBP14.77□□□□□ -0.05
TREX1-204ENST00000492235 CA3P07451 260 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 PFKMP08237 780 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 SUPT20HL2P0C7V6 817 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 SLC16A2P36021 539 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 ALDH5A1P51649 535 aaPredicted RBP14.77□□□□□ -0.05
TREX1-204ENST00000492235 PURAQ00577 322 aaKnown RBP14.77□□□□□ -0.05
TREX1-204ENST00000492235 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 TMEM67Q5HYA8 995 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 TTBK2Q6IQ55 1244 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.05
TREX1-204ENST00000492235 OTUD7AQ8TE49 926 aaPredicted RBP14.77□□□□□ -0.05
TREX1-204ENST00000492235 RANBP17Q9H2T7 1088 aaKnown RBP14.77□□□□□ -0.05
TREX1-204ENST00000492235 XIRP2A4UGR9 3374 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 ERC2O15083 957 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 FOXP2O15409 715 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 BMP1P13497 986 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 CPT1AP50416 773 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 KCNQ1P51787 676 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
TREX1-204ENST00000492235 MTG1Q9BT17 334 aaPredicted RBP14.76□□□□□ -0.05
TREX1-204ENST00000492235 GPHNQ9NQX3 736 aaPredicted RBP14.76□□□□□ -0.05
TREX1-204ENST00000492235 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
TREX1-204ENST00000492235 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
TREX1-204ENST00000492235 ACTN1P12814 892 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 CALML3P27482 149 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 NBPF20Q3BBV1 942 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 SLC30A10Q6XR72 485 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 MTCH2Q9Y6C9 303 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 TANC1Q9C0D5 1861 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 BDP1A6H8Y1 2624 aa14.75□□□□□ -0.05
TREX1-204ENST00000492235 SCN10AQ9Y5Y9 1956 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
TREX1-204ENST00000492235 EPOPA6NHQ4 379 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
TREX1-204ENST00000492235 AAK1Q2M2I8 961 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 VPS53Q5VIR6 699 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 KRT40Q6A162 431 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 BTNL9Q6UXG8 535 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 ARNTL2Q8WYA1 636 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 SLC9A7Q96T83 725 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
TREX1-204ENST00000492235 TOMM22Q9NS69 142 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 PRRC2BQ5JSZ5 2229 aaKnown RBP14.74□□□□□ -0.05
TREX1-204ENST00000492235 NCOR1O75376 2440 aa14.74□□□□□ -0.05
TREX1-204ENST00000492235 TRANK1O15050 2925 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 ARHGEF15O94989 841 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 RFC2P35250 354 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 NOVP48745 357 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 CHMP4BP1P59074 171 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 PDE4DQ08499 809 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
TREX1-204ENST00000492235 BRDTQ58F21 947 aaPredicted RBP14.73□□□□□ -0.05
TREX1-204ENST00000492235 RRP12Q5JTH9 1297 aaKnown RBP14.73□□□□□ -0.05
TREX1-204ENST00000492235 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 RETREG2Q8NC44 543 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 CLEC4DQ8WXI8 215 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 COPS5Q92905 334 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
TREX1-204ENST00000492235 RAD50Q92878 1312 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 ORC4O43929 436 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
TREX1-204ENST00000492235 POU3F3P20264 500 aaPredicted RBP14.72□□□□□ -0.05
TREX1-204ENST00000492235 MX1P20591 662 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 TAP1Q03518 808 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms