RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 SMARCA1P28370 1054 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 MNX1P50219 401 aaPredicted RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 ANAPC15P60006 121 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 RPS6P62753 249 aaKnown RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 PWP2Q15269 919 aaKnown RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 ARMCX2Q7L311 632 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 RGS22Q8NE09 1264 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 RRP36Q96EU6 259 aaKnown RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 RBM28Q9NW13 759 aaKnown RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.94■■□□□ 1.9
CPNE9-204ENST00000491802 CNPY2Q9Y2B0 182 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 PCDHA1Q9Y5I3 950 aa26.94■■□□□ 1.9
CPNE9-204ENST00000491802 RCAN1P53805 252 aa26.93■■□□□ 1.9
CPNE9-204ENST00000491802 SEC63Q9UGP8 760 aaKnown RBP26.93■■□□□ 1.9
CPNE9-204ENST00000491802 SNAI1O95863 264 aaPredicted RBP26.92■■□□□ 1.9
CPNE9-204ENST00000491802 ZNF865P0CJ78 1059 aaPredicted RBP26.92■■□□□ 1.9
CPNE9-204ENST00000491802 TRAF1Q13077 416 aa26.92■■□□□ 1.9
CPNE9-204ENST00000491802 MCF2L2Q86YR7 1114 aa26.92■■□□□ 1.9
CPNE9-204ENST00000491802 CCDC82Q8N4S0 544 aa26.92■■□□□ 1.9
CPNE9-204ENST00000491802 ZHX1Q9UKY1 873 aaPredicted RBP26.92■■□□□ 1.9
CPNE9-204ENST00000491802 LRRC37A2A6NM11 1700 aa26.92■■□□□ 1.9
CPNE9-204ENST00000491802 ASB14A6NK59 587 aa26.91■■□□□ 1.9
CPNE9-204ENST00000491802 METAP2P50579 478 aaKnown RBP eCLIP26.91■■□□□ 1.9
CPNE9-204ENST00000491802 ADD3Q9UEY8 706 aaKnown RBP26.91■■□□□ 1.9
CPNE9-204ENST00000491802 BAZ2BQ9UIF8 2168 aaKnown RBP26.91■■□□□ 1.9
CPNE9-204ENST00000491802 CNTNAP5Q8WYK1 1306 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 NID2Q14112 1375 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 OPLAHO14841 1288 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 ALDH5A1P51649 535 aaPredicted RBP26.9■■□□□ 1.9
CPNE9-204ENST00000491802 TOB2Q14106 344 aaPredicted RBP26.9■■□□□ 1.9
CPNE9-204ENST00000491802 NECAB2Q7Z6G3 386 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 MORC4Q8TE76 937 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 TBC1D5Q92609 795 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 HTATIP2Q9BUP3 242 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 ABHD16BQ9H3Z7 469 aa26.9■■□□□ 1.9
CPNE9-204ENST00000491802 DDX49Q9Y6V7 483 aaKnown RBP26.9■■□□□ 1.9
CPNE9-204ENST00000491802 AKR1A1P14550 325 aa26.89■■□□□ 1.9
CPNE9-204ENST00000491802 CDC27P30260 824 aa26.89■■□□□ 1.9
CPNE9-204ENST00000491802 ANO1Q5XXA6 986 aa26.89■■□□□ 1.9
CPNE9-204ENST00000491802 PAWRQ96IZ0 340 aaKnown RBP26.89■■□□□ 1.9
CPNE9-204ENST00000491802 KATNBL1Q9H079 304 aa26.89■■□□□ 1.9
CPNE9-204ENST00000491802 FAM217BQ9NTX9 383 aaPredicted RBP26.89■■□□□ 1.9
CPNE9-204ENST00000491802 PDRG1Q9NUG6 133 aa26.89■■□□□ 1.9
CPNE9-204ENST00000491802 hCG_1642624A0A1W2PR95 340 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 CFBP00751 764 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 COL6A1P12109 1028 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 GHRHRQ02643 423 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 ACVR2BQ13705 512 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 SYTL5Q8TDW5 730 aaPredicted RBP26.88■■□□□ 1.89
CPNE9-204ENST00000491802 ALPK3Q96L96 1907 aa26.88■■□□□ 1.89
CPNE9-204ENST00000491802 DIS3LQ8TF46 1054 aaKnown RBP26.87■■□□□ 1.89
CPNE9-204ENST00000491802 IL17RAQ96F46 866 aa26.87■■□□□ 1.89
CPNE9-204ENST00000491802 COL20A1Q9P218 1284 aa26.87■■□□□ 1.89
CPNE9-204ENST00000491802 CCDC196A0A1B0GTZ2 297 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 DNM1LO00429 736 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 HSD17B4P51659 736 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 EVCP57679 992 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 FUT2Q10981 343 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 PPP2R5BQ15173 497 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 SAMD3Q8N6K7 520 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 ARRDC4Q8NCT1 418 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 DNERQ8NFT8 737 aa26.86■■□□□ 1.89
CPNE9-204ENST00000491802 ADD1P35611 737 aaKnown RBP26.85■■□□□ 1.89
CPNE9-204ENST00000491802 PRPF38BQ5VTL8 546 aaKnown RBP26.85■■□□□ 1.89
CPNE9-204ENST00000491802 FBXO16Q8IX29 292 aaPredicted RBP26.85■■□□□ 1.89
CPNE9-204ENST00000491802 LENG1Q96BZ8 264 aaPredicted RBP26.85■■□□□ 1.89
CPNE9-204ENST00000491802 C11orf49Q9H6J7 331 aa26.85■■□□□ 1.89
CPNE9-204ENST00000491802 MAP3K20Q9NYL2 800 aaKnown RBP26.85■■□□□ 1.89
CPNE9-204ENST00000491802 FAM184BQ9ULE4 1060 aa26.85■■□□□ 1.89
CPNE9-204ENST00000491802 RARBP10826 455 aa26.84■■□□□ 1.89
CPNE9-204ENST00000491802 PDIA3P30101 505 aaKnown RBP26.84■■□□□ 1.89
CPNE9-204ENST00000491802 EEPD1Q7L9B9 569 aa26.84■■□□□ 1.89
CPNE9-204ENST00000491802 TAAR1Q96RJ0 339 aa26.84■■□□□ 1.89
CPNE9-204ENST00000491802 MPHOSPH6Q99547 160 aaKnown RBP26.84■■□□□ 1.89
CPNE9-204ENST00000491802 LARP6Q9BRS8 491 aaKnown RBP26.84■■□□□ 1.89
CPNE9-204ENST00000491802 HOXA13P31271 388 aaPredicted RBP26.83■■□□□ 1.89
CPNE9-204ENST00000491802 CCDC144BQ3MJ40 725 aa26.83■■□□□ 1.89
CPNE9-204ENST00000491802 HEATR3Q7Z4Q2 680 aa26.83■■□□□ 1.89
CPNE9-204ENST00000491802 GPKOWQ92917 476 aaPredicted RBP eCLIP26.83■■□□□ 1.89
CPNE9-204ENST00000491802 GCOM1H8Y6P7 765 aaPredicted RBP26.82■■□□□ 1.88
CPNE9-204ENST00000491802 POLR2MP0CAP2 368 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 EDNRBP24530 442 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 CCT2P78371 535 aaKnown RBP26.82■■□□□ 1.88
CPNE9-204ENST00000491802 PDE4DQ08499 809 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 NSUN6Q8TEA1 469 aaKnown RBP26.82■■□□□ 1.88
CPNE9-204ENST00000491802 RMDN3Q96TC7 470 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 NCOA5Q9HCD5 579 aaKnown RBP26.82■■□□□ 1.88
CPNE9-204ENST00000491802 VTA1Q9NP79 307 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 XPNPEP3Q9NQH7 507 aa26.82■■□□□ 1.88
CPNE9-204ENST00000491802 B4DLN1 442 aa26.81■■□□□ 1.88
CPNE9-204ENST00000491802 DUSP11O75319 330 aaKnown RBP26.81■■□□□ 1.88
CPNE9-204ENST00000491802 MRPL12P52815 198 aaKnown RBP26.81■■□□□ 1.88
CPNE9-204ENST00000491802 V9GY48 417 aaPredicted RBP26.81■■□□□ 1.88
CPNE9-204ENST00000491802 CEP290O15078 2479 aa26.81■■□□□ 1.88
CPNE9-204ENST00000491802 ADCY6O43306 1168 aa26.8■■□□□ 1.88
CPNE9-204ENST00000491802 MYCNP04198 464 aaPredicted RBP26.8■■□□□ 1.88
CPNE9-204ENST00000491802 EIF2AK2P19525 551 aaKnown RBP26.8■■□□□ 1.88
CPNE9-204ENST00000491802 NKX3-2P78367 333 aa26.8■■□□□ 1.88
CPNE9-204ENST00000491802 LRRC41Q15345 812 aa26.8■■□□□ 1.88
CPNE9-204ENST00000491802 ARHGEF16Q5VV41 709 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms