RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 TCP11L1Q9NUJ3 509 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 SCN5AQ14524 2016 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 ELP1O95163 1332 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 A0A0U1RQG5 324 aaPredicted RBP12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 ASB14A6NK59 587 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 DCDC2CA8MYV0 355 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 ARVCFO00192 962 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 BAATQ14032 418 aaPredicted RBP12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 RNF20Q5VTR2 975 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 CXCL17Q6UXB2 119 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 PCSK9Q8NBP7 692 aaKnown RBP12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 CLEC4DQ8WXI8 215 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 KIAA1217Q5T5P2 1943 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 TANC1Q9C0D5 1861 aa12.91□□□□□ -0.34
TMEM39A-211ENST00000491685 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 UMODL1Q5DID0 1318 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 TIMP1P01033 207 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 PSMC6P62333 389 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 SMAD3P84022 425 aaKnown RBP12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 FSCN1Q16658 493 aaKnown RBP12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 MFSD6Q6ZSS7 791 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 C16orf59Q7L2K0 433 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 MORC4Q8TE76 937 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 MYLIPQ8WY64 445 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.346e-8■■■□□ 15.2
TMEM39A-211ENST00000491685 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
TMEM39A-211ENST00000491685 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 DYNC1LI2O43237 492 aaPredicted RBP12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 CD4P01730 458 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 CSF2RAP15509 400 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 TRDNQ13061 729 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
TMEM39A-211ENST00000491685 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 B4E1Z4 1266 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 EPB41L2O43491 1005 aaKnown RBP12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 ACRP10323 421 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 FOSL2P15408 326 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 COL9A1P20849 921 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 CALML3P27482 149 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 CYP2C18P33260 490 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 MFSD5Q6N075 450 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
TMEM39A-211ENST00000491685 KDM4AO75164 1064 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 USH1GQ495M9 461 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 ESR2Q92731 530 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 KRT23Q9C075 422 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 PTPRSQ13332 1948 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
TMEM39A-211ENST00000491685 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 B4GALT4O60513 344 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 PBX2P40425 430 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 DUSP28Q4G0W2 176 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 RASIP1Q5U651 963 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 COPS5Q92905 334 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 TTC14Q96N46 770 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 TNKSO95271 1327 aa12.86□□□□□ -0.35
TMEM39A-211ENST00000491685 RBM47A0AV96 593 aaKnown RBP12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 RBAK-RBAKDNI3L0D1 243 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 ARIH2O95376 493 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 EDNRBP24530 442 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 DNAJB2P25686 324 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 PTH1RQ03431 593 aa12.85□□□□□ -0.35
TMEM39A-211ENST00000491685 PPIGQ13427 754 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■□□□□ 8.7
TMEM39A-211ENST00000491685 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms