RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 CPA4Q9UI42 421 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 IKBKBO14920 756 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 USP2O75604 605 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 FOXK2Q01167 660 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 NR5A1Q13285 461 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 SUPT20HL1Q3ZLR7 823 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 EHD4Q9H223 541 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 DHX36Q9H2U1 1008 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 PCDHA4Q9UN74 947 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 PCDHB6Q9Y5E3 794 aa13.59□□□□□ -0.23
SRGAP3-210ENST00000491467 PARP1P09874 1014 aaKnown RBP13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 ELNP15502 786 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 ZNF75DP51815 510 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 NPY5RQ15761 445 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 TTC38Q5R3I4 469 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 TRIM5Q9C035 493 aa13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
SRGAP3-210ENST00000491467 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 LAD1O00515 517 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 EVX2Q03828 476 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 NT5DC1Q5TFE4 455 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 CERS5Q8N5B7 392 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 DACH1Q9UI36 760 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 SERPINB13Q9UIV8 391 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 GABRQQ9UN88 632 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
SRGAP3-210ENST00000491467 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 NEMFO60524 1076 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 GNA11P29992 359 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 CRKP46108 304 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 ATP2C1P98194 919 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 CDC42EP5Q6NZY7 148 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 RRP36Q96EU6 259 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 CLIC6Q96NY7 704 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 MXD3Q9BW11 206 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
SRGAP3-210ENST00000491467 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 BTBD19C9JJ37 291 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 M0R2N6 131 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 AP5Z1O43299 807 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 SMC2O95347 1197 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 TERF1P54274 439 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 SMAD3P84022 425 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 LONRF3Q496Y0 759 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 RIOX1Q9H6W3 641 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
SRGAP3-210ENST00000491467 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 GPR37L1O60883 481 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 OFD1O75665 1012 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 TTLL1O95922 423 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 FCGRTP55899 365 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 NHLH1Q02575 133 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms