RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
CNOT4-210ENST00000491203 AGTPBP1Q9UPW5 1226 aa9.88□□□□□ -0.83
CNOT4-210ENST00000491203 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-210ENST00000491203 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L15C9J2P7 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L13C9JLJ4 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L11C9JVI0 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L18D6R9N7 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L22D6RA61 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L17D6RBQ6 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L19D6RCP7 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L20D6RJB6 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 PARP1P09874 1014 aaKnown RBP9.87□□□□□ -0.83
CNOT4-210ENST00000491203 SNHG28P0DPA3 235 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 RXRAP19793 462 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 KIF5BP33176 963 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 MCM2P49736 904 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 RCAN1P53805 252 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 EVCP57679 992 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 ZNF543Q08ER8 600 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 USP17L24Q0WX57 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 TROAPQ12815 778 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 MOGSQ13724 837 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 RTN1Q16799 776 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 ASPRV1Q53RT3 343 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 TREML2Q5T2D2 321 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
CNOT4-210ENST00000491203 OTUD7BQ6GQQ9 843 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 GPAT2Q6NUI2 795 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 ANKRD23Q86SG2 305 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 MICU3Q86XE3 530 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 MAP3K14Q99558 947 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
CNOT4-210ENST00000491203 BTBD19C9JJ37 291 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 PDHXO00330 501 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 GOLGA8HP0CJ92 632 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 PDIA3P30101 505 aaKnown RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 MAP2K2P36507 400 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 GNAQP50148 359 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 IRX3P78415 501 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 IKQ13123 557 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 GPATCH4Q5T3I0 446 aaKnown RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 CATSPERGQ6ZRH7 1159 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 RASGRP2Q7LDG7 609 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 CCDC144CPQ8IYA2 1237 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 ZNF511Q8NB15 262 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 FANCBQ8NB91 859 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 ZNF274Q96GC6 653 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 PTPN18Q99952 460 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 RBM28Q9NW13 759 aaKnown RBP9.86□□□□□ -0.83
CNOT4-210ENST00000491203 FEM1BQ9UK73 627 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 TPCN1Q9ULQ1 816 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 LIMCH1Q9UPQ0 1083 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 SLC45A1Q9Y2W3 748 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
CNOT4-210ENST00000491203 CCDC196A0A1B0GTZ2 297 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 TMEM232C9JQI7 657 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 KLRF2D3W0D1 207 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 LILRB3O75022 631 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 FLOT1O75955 427 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 HOXA7P31268 230 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 TM4SF4P48230 202 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 STAT2P52630 851 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 STK3Q13188 491 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 PPP2R5BQ15173 497 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 TTBK2Q6IQ55 1244 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 FAM160B2Q86V87 743 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 CHURC1Q8WUH1 139 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 ZSCAN31Q96LW9 406 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 PARK7Q99497 189 aaKnown RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 SLF1Q9BQI6 1058 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 LZTS2Q9BRK4 669 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 ASCC2Q9H1I8 757 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 ZCCHC17Q9NP64 241 aaKnown RBP9.85□□□□□ -0.83
CNOT4-210ENST00000491203 MAD2L2Q9UI95 211 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 PTPRFP10586 1907 aa9.85□□□□□ -0.83
CNOT4-210ENST00000491203 IGF2BP3O00425 579 aaKnown RBP eCLIP9.84□□□□□ -0.83
CNOT4-210ENST00000491203 DHX16O60231 1041 aaKnown RBP9.84□□□□□ -0.83
CNOT4-210ENST00000491203 PLA2G6O60733 806 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 PFKFB2O60825 505 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
CNOT4-210ENST00000491203 SLC16A2P36021 539 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 CCT2P78371 535 aaKnown RBP9.84□□□□□ -0.83
CNOT4-210ENST00000491203 COG2Q14746 738 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 ME3Q16798 604 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 SYDE2Q5VT97 1194 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 CPLX2Q6PUV4 134 aaKnown RBP9.84□□□□□ -0.83
CNOT4-210ENST00000491203 BTNL9Q6UXG8 535 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 TMTC3Q6ZXV5 915 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 STAG2Q8N3U4 1231 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
CNOT4-210ENST00000491203 UBA5Q9GZZ9 404 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms