RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 CLEC4DQ8WXI8 215 aa24.58■■□□□ 1.53
SYNE4-205ENST00000490730 DSCC1Q9BVC3 393 aa24.58■■□□□ 1.53
SYNE4-205ENST00000490730 UBA5Q9GZZ9 404 aa24.58■■□□□ 1.53
SYNE4-205ENST00000490730 CABYRO75952 493 aa24.57■■□□□ 1.52
SYNE4-205ENST00000490730 MFSD5Q6N075 450 aa24.57■■□□□ 1.52
SYNE4-205ENST00000490730 MORC4Q8TE76 937 aa24.57■■□□□ 1.52
SYNE4-205ENST00000490730 ZSCAN10Q96SZ4 725 aaPredicted RBP24.57■■□□□ 1.52
SYNE4-205ENST00000490730 CTNNA3Q9UI47 895 aa24.57■■□□□ 1.52
SYNE4-205ENST00000490730 WDR19Q8NEZ3 1342 aa24.57■■□□□ 1.52
SYNE4-205ENST00000490730 RPS6P62753 249 aaKnown RBP24.56■■□□□ 1.52
SYNE4-205ENST00000490730 PDE4DQ08499 809 aa24.56■■□□□ 1.52
SYNE4-205ENST00000490730 PPIGQ13427 754 aaKnown RBP eCLIP24.56■■□□□ 1.526e-8■□□□□ 9.1
SYNE4-205ENST00000490730 ITGA7Q13683 1181 aa24.56■■□□□ 1.52
SYNE4-205ENST00000490730 MPHOSPH6Q99547 160 aaKnown RBP24.56■■□□□ 1.52
SYNE4-205ENST00000490730 WDR11Q9BZH6 1224 aa24.56■■□□□ 1.52
SYNE4-205ENST00000490730 DHX16O60231 1041 aaKnown RBP24.55■■□□□ 1.52
SYNE4-205ENST00000490730 NT5C2P49902 561 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 PSMC6P62333 389 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 CDC37Q16543 378 aaPredicted RBP24.55■■□□□ 1.52
SYNE4-205ENST00000490730 DUSP28Q4G0W2 176 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 TMEM199Q8N511 208 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 SEMA6BQ9H3T3 888 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 Q9Y3F1 56 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 TNKSO95271 1327 aa24.55■■□□□ 1.52
SYNE4-205ENST00000490730 LOC102724159A0A0B4J2E5 919 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 CSF2RAP15509 400 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 PDE4AP27815 886 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 IRX6P78412 446 aaPredicted RBP24.54■■□□□ 1.52
SYNE4-205ENST00000490730 PWP2Q15269 919 aaKnown RBP24.54■■□□□ 1.52
SYNE4-205ENST00000490730 ENAHQ8N8S7 591 aaPredicted RBP24.54■■□□□ 1.52
SYNE4-205ENST00000490730 CDX2Q99626 313 aaPredicted RBP24.54■■□□□ 1.52
SYNE4-205ENST00000490730 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.54■■□□□ 1.527e-6■□□□□ 9.4
SYNE4-205ENST00000490730 UBAC1Q9BSL1 405 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 KRT23Q9C075 422 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 ZSWIM5Q9P217 1185 aa24.54■■□□□ 1.52
SYNE4-205ENST00000490730 DLL1O00548 723 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 CYP2C18P33260 490 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 IL25Q9H293 177 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 CNNM2Q9H8M5 875 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 MYH6P13533 1939 aa24.53■■□□□ 1.52
SYNE4-205ENST00000490730 CD4P01730 458 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 ACRP10323 421 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 ASPRV1Q53RT3 343 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 TTC22Q5TAA0 569 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 ADGRF4Q8IZF3 695 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 SLC43A3Q8NBI5 491 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 OR6J1Q8NGC5 347 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 TRPV6Q9H1D0 765 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 TTYH1Q9H313 450 aaPredicted RBP24.52■■□□□ 1.52
SYNE4-205ENST00000490730 HIPK3Q9H422 1215 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 GRIN2DO15399 1336 aa24.52■■□□□ 1.52
SYNE4-205ENST00000490730 B4DLN1 442 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 MYL3P08590 195 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 PARP1P09874 1014 aaKnown RBP24.51■■□□□ 1.51
SYNE4-205ENST00000490730 GSPT1P15170 499 aaKnown RBP24.51■■□□□ 1.51
SYNE4-205ENST00000490730 MRPL12P52815 198 aaKnown RBP24.51■■□□□ 1.51
SYNE4-205ENST00000490730 PPP2R5BQ15173 497 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 DNERQ8NFT8 737 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 ANKS1AQ92625 1134 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 VAT1LQ9HCJ6 419 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 ABCB11O95342 1321 aa24.51■■□□□ 1.51
SYNE4-205ENST00000490730 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.5■■□□□ 1.51
SYNE4-205ENST00000490730 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.5■■□□□ 1.51
SYNE4-205ENST00000490730 CPT1AP50416 773 aa24.5■■□□□ 1.51
SYNE4-205ENST00000490730 IFIT1BQ5T764 474 aaKnown RBP24.5■■□□□ 1.51
SYNE4-205ENST00000490730 C16orf59Q7L2K0 433 aa24.5■■□□□ 1.51
SYNE4-205ENST00000490730 MYLIPQ8WY64 445 aa24.5■■□□□ 1.51
SYNE4-205ENST00000490730 GPHNQ9NQX3 736 aaPredicted RBP24.5■■□□□ 1.51
SYNE4-205ENST00000490730 POLR3EQ9NVU0 708 aa24.5■■□□□ 1.51
SYNE4-205ENST00000490730 RBM47A0AV96 593 aaKnown RBP24.49■■□□□ 1.51
SYNE4-205ENST00000490730 B4GALT4O60513 344 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 QRICH1Q2TAL8 776 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 TMEM240Q5SV17 173 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 PSRC1Q6PGN9 363 aaPredicted RBP24.49■■□□□ 1.51
SYNE4-205ENST00000490730 SCFD2Q8WU76 684 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 SEZ6LQ9BYH1 1024 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 UMODL1Q5DID0 1318 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 RAD50Q92878 1312 aa24.49■■□□□ 1.51
SYNE4-205ENST00000490730 EDNRBP24530 442 aa24.48■■□□□ 1.51
SYNE4-205ENST00000490730 DNAJB2P25686 324 aa24.48■■□□□ 1.51
SYNE4-205ENST00000490730 BRDTQ58F21 947 aaPredicted RBP24.48■■□□□ 1.51
SYNE4-205ENST00000490730 ZNF365Q70YC5 407 aa24.48■■□□□ 1.51
SYNE4-205ENST00000490730 RGS22Q8NE09 1264 aa24.48■■□□□ 1.51
SYNE4-205ENST00000490730 TBC1D5Q92609 795 aa24.48■■□□□ 1.51
SYNE4-205ENST00000490730 UNC80Q8N2C7 3258 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 TXNP10599 105 aaKnown RBP24.47■■□□□ 1.51
SYNE4-205ENST00000490730 CCL23P55773 120 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 PURAQ00577 322 aaKnown RBP24.47■■□□□ 1.51
SYNE4-205ENST00000490730 TRDNQ13061 729 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 FBXO11Q86XK2 927 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 RUFY2Q8WXA3 655 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 COPS5Q92905 334 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 ALDH8A1Q9H2A2 487 aaPredicted RBP24.47■■□□□ 1.51
SYNE4-205ENST00000490730 IL23AQ9NPF7 189 aa24.47■■□□□ 1.51
SYNE4-205ENST00000490730 NKRFO15226 690 aaKnown RBP eCLIP24.46■■□□□ 1.516e-6■■□□□ 11.7
SYNE4-205ENST00000490730 FOSL2P15408 326 aa24.46■■□□□ 1.51
SYNE4-205ENST00000490730 FAM47CQ5HY64 1035 aa24.46■■□□□ 1.51
SYNE4-205ENST00000490730 CYB5R4Q7L1T6 521 aa24.46■■□□□ 1.51
SYNE4-205ENST00000490730 MCF2L2Q86YR7 1114 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms