RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 LNPKQ9C0E8 428 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 RNF41Q9H4P4 317 aaPredicted RBP20.91■□□□□ 0.94
YIPF3-208ENST00000490447 IL23AQ9NPF7 189 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 PTGS1P23219 599 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 CALML3P27482 149 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 DUSP28Q4G0W2 176 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 TTC14Q96N46 770 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 PBX4Q9BYU1 374 aa20.9■□□□□ 0.94
YIPF3-208ENST00000490447 B4GALT4O60513 344 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 CPT1AP50416 773 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 PSMC6P62333 389 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 RASIP1Q5U651 963 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 RNF207Q6ZRF8 634 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 ESR2Q92731 530 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 GAS2L1Q99501 681 aaPredicted RBP20.89■□□□□ 0.93
YIPF3-208ENST00000490447 WDR11Q9BZH6 1224 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 GPHNQ9NQX3 736 aaPredicted RBP20.89■□□□□ 0.93
YIPF3-208ENST00000490447 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
YIPF3-208ENST00000490447 SPTBN5Q9NRC6 3674 aaKnown RBP20.88■□□□□ 0.93
YIPF3-208ENST00000490447 FGBP02675 491 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 CCL23P55773 120 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 PDE4DQ08499 809 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 ZNF543Q08ER8 600 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 AAMPQ13685 434 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 BRDTQ58F21 947 aaPredicted RBP20.88■□□□□ 0.93
YIPF3-208ENST00000490447 TMEM63BQ5T3F8 832 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 SLC30A10Q6XR72 485 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 TRPV6Q9H1D0 765 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 MSRAQ9UJ68 235 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 RAD50Q92878 1312 aa20.88■□□□□ 0.93
YIPF3-208ENST00000490447 GRXCR1A8MXD5 290 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 B4DLN1 442 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 PBX2P40425 430 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 MRPL12P52815 198 aaKnown RBP20.87■□□□□ 0.93
YIPF3-208ENST00000490447 RAB30Q15771 203 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 GPATCH4Q5T3I0 446 aaKnown RBP20.87■□□□□ 0.93
YIPF3-208ENST00000490447 B4GALNT3Q6L9W6 998 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 OR6J1Q8NGC5 347 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 HERVK_113Q902F9 699 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 RWDD1Q9H446 243 aaPredicted RBP20.87■□□□□ 0.93
YIPF3-208ENST00000490447 GRIN2DO15399 1336 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 UMODL1Q5DID0 1318 aa20.87■□□□□ 0.93
YIPF3-208ENST00000490447 ZNF213O14771 459 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 MYL3P08590 195 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 SUPT20HL2P0C7V6 817 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 PPP2R5BQ15173 497 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 TBC1D10CQ8IV04 446 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 RPUSD2Q8IZ73 545 aaKnown RBP20.86■□□□□ 0.93
YIPF3-208ENST00000490447 NOC4LQ9BVI4 516 aaKnown RBP20.86■□□□□ 0.93
YIPF3-208ENST00000490447 ALDH8A1Q9H2A2 487 aaPredicted RBP20.86■□□□□ 0.93
YIPF3-208ENST00000490447 WDR19Q8NEZ3 1342 aa20.86■□□□□ 0.93
YIPF3-208ENST00000490447 SNHG28P0DPA3 235 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 SDSP20132 328 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 NT5C2P49902 561 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 RPS6P62753 249 aaKnown RBP20.85■□□□□ 0.93
YIPF3-208ENST00000490447 USH1GQ495M9 461 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 OTOP2Q7RTS6 562 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 IQCA1Q86XH1 822 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 DNERQ8NFT8 737 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 CLEC4DQ8WXI8 215 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 SYMPKQ92797 1274 aaKnown RBP20.85■□□□□ 0.93
YIPF3-208ENST00000490447 ZKSCAN3Q9BRR0 538 aa20.85■□□□□ 0.93
YIPF3-208ENST00000490447 NEDD4P46934 1319 aa20.84■□□□□ 0.93
YIPF3-208ENST00000490447 NKRFO15226 690 aaKnown RBP eCLIP20.84■□□□□ 0.93
YIPF3-208ENST00000490447 PURAQ00577 322 aaKnown RBP20.84■□□□□ 0.93
YIPF3-208ENST00000490447 CCDC178Q5BJE1 867 aa20.84■□□□□ 0.93
YIPF3-208ENST00000490447 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
YIPF3-208ENST00000490447 MTG1Q9BT17 334 aaPredicted RBP20.84■□□□□ 0.93
YIPF3-208ENST00000490447 LCTP09848 1927 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 TNKSO95271 1327 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 RBM47A0AV96 593 aaKnown RBP20.83■□□□□ 0.93
YIPF3-208ENST00000490447 GOLGA8HP0CJ92 632 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 FAM47CQ5HY64 1035 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 SMC5Q8IY18 1101 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 WNT8AQ9H1J5 351 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 PRDM12Q9H4Q4 367 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 SLC28A3Q9HAS3 691 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 DIAPH3Q9NSV4 1193 aa20.83■□□□□ 0.93
YIPF3-208ENST00000490447 CXXC1Q9P0U4 656 aaPredicted RBP20.83■□□□□ 0.93
YIPF3-208ENST00000490447 ZBBXA8MT70 800 aa20.82■□□□□ 0.92
YIPF3-208ENST00000490447 HIP1O00291 1037 aa20.82■□□□□ 0.92
YIPF3-208ENST00000490447 CWC27Q6UX04 472 aaKnown RBP20.82■□□□□ 0.92
YIPF3-208ENST00000490447 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
YIPF3-208ENST00000490447 SCLYQ96I15 445 aa20.82■□□□□ 0.92
YIPF3-208ENST00000490447 TRMT13Q9NUP7 481 aaKnown RBP20.82■□□□□ 0.92
YIPF3-208ENST00000490447 SLC4A7Q9Y6M7 1214 aa20.82■□□□□ 0.92
YIPF3-208ENST00000490447 PFKMP08237 780 aa20.81■□□□□ 0.92
YIPF3-208ENST00000490447 TXNP10599 105 aaKnown RBP20.81■□□□□ 0.92
YIPF3-208ENST00000490447 EDNRBP24530 442 aa20.81■□□□□ 0.92
YIPF3-208ENST00000490447 PPM1EQ8WY54 764 aa20.81■□□□□ 0.92
YIPF3-208ENST00000490447 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
YIPF3-208ENST00000490447 NKX2-4Q9H2Z4 354 aa20.81■□□□□ 0.92
YIPF3-208ENST00000490447 KPNA6O60684 536 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 KDM4AO75164 1064 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 CYP2C9P11712 490 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 TTLL4Q14679 1199 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms